Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
Ddx41Q91VN6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Rab3c-203ENSMUST00000224180 967 ntBASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx41Q91VN6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx41Q91VN6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx41Q91VN6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Gm22240-201ENSMUST00000175225 82 ntBASIC21.01■□□□□ 0.95
Ddx41Q91VN6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.01■□□□□ 0.95
Ddx41Q91VN6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Gm37856-201ENSMUST00000191634 999 ntBASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx41Q91VN6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx41Q91VN6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Gm8520-201ENSMUST00000186517 868 ntBASIC21■□□□□ 0.95
Ddx41Q91VN6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx41Q91VN6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21■□□□□ 0.95
Ddx41Q91VN6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21■□□□□ 0.95
Ddx41Q91VN6 Gm6627-201ENSMUST00000218299 2386 ntBASIC21■□□□□ 0.95
Ddx41Q91VN6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx41Q91VN6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx41Q91VN6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx41Q91VN6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ddx41Q91VN6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms