Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.06■□□□□ 0.64
Trim60Q8VI40 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim60Q8VI40 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.05■□□□□ 0.64
Trim60Q8VI40 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.05■□□□□ 0.64
Trim60Q8VI40 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim60Q8VI40 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.04■□□□□ 0.64
Trim60Q8VI40 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.04■□□□□ 0.64
Trim60Q8VI40 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim60Q8VI40 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.03■□□□□ 0.64
Trim60Q8VI40 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Gm43017-201ENSMUST00000198296 752 ntBASIC19.03■□□□□ 0.64
Trim60Q8VI40 Gm45417-201ENSMUST00000209533 758 ntBASIC19.03■□□□□ 0.64
Trim60Q8VI40 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim60Q8VI40 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim60Q8VI40 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Gm43060-201ENSMUST00000200621 289 ntBASIC19.02■□□□□ 0.64
Trim60Q8VI40 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trim60Q8VI40 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim60Q8VI40 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Trim60Q8VI40 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim60Q8VI40 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim60Q8VI40 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19■□□□□ 0.63
Trim60Q8VI40 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19■□□□□ 0.63
Trim60Q8VI40 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19■□□□□ 0.63
Trim60Q8VI40 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim60Q8VI40 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim60Q8VI40 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms