Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.26■□□□□ 0.83
LINC01555Q8NAE3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01555Q8NAE3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 AC080038.1-201ENST00000611274 1154 ntBASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01555Q8NAE3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 AC010536.3-201ENST00000620306 533 ntBASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01555Q8NAE3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 DUX4L16-201ENST00000555130 1264 ntBASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.22■□□□□ 0.83
LINC01555Q8NAE3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 CDCA4P2-201ENST00000441182 718 ntBASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 RAP2CP1-201ENST00000605103 478 ntBASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 AC073111.5-205ENST00000641717 521 ntBASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01555Q8NAE3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 AC026310.3-201ENST00000625186 2373 ntBASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01555Q8NAE3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms