Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Alx1Q8C8B0 Gm2399-201ENSMUST00000104944 225 ntBASIC21.58■■□□□ 1.05
Alx1Q8C8B0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.58■■□□□ 1.05
Alx1Q8C8B0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.58■■□□□ 1.05
Alx1Q8C8B0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Alx1Q8C8B0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Alx1Q8C8B0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.58■■□□□ 1.04
Alx1Q8C8B0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Alx1Q8C8B0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Gm2559-201ENSMUST00000201323 363 ntBASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Alx1Q8C8B0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Alx1Q8C8B0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.56■■□□□ 1.04
Alx1Q8C8B0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
Alx1Q8C8B0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Gm12896-201ENSMUST00000118430 226 ntBASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Alx1Q8C8B0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Alx1Q8C8B0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Alx1Q8C8B0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Alx1Q8C8B0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Gm37856-201ENSMUST00000191634 999 ntBASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Alx1Q8C8B0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Flg-201ENSMUST00000050758 1488 ntBASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Alx1Q8C8B0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 277.1 ms