Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Foxd1Q61345 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.26■□□□□ 0.99
Foxd1Q61345 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Foxd1Q61345 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Gm7860-201ENSMUST00000121190 879 ntBASIC21.26■□□□□ 0.99
Foxd1Q61345 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Foxd1Q61345 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxd1Q61345 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Foxd1Q61345 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Foxd1Q61345 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.25■□□□□ 0.99
Foxd1Q61345 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Foxd1Q61345 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Foxd1Q61345 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.25■□□□□ 0.99
Foxd1Q61345 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Foxd1Q61345 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Foxd1Q61345 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxd1Q61345 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Foxd1Q61345 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.24■□□□□ 0.99
Foxd1Q61345 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxd1Q61345 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Foxd1Q61345 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Foxd1Q61345 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Foxd1Q61345 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.23■□□□□ 0.99
Foxd1Q61345 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.23■□□□□ 0.99
Foxd1Q61345 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Foxd1Q61345 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Foxd1Q61345 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Foxd1Q61345 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Foxd1Q61345 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Foxd1Q61345 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.21■□□□□ 0.99
Foxd1Q61345 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Foxd1Q61345 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxd1Q61345 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxd1Q61345 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxd1Q61345 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Foxd1Q61345 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxd1Q61345 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.21■□□□□ 0.99
Foxd1Q61345 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Foxd1Q61345 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxd1Q61345 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Foxd1Q61345 Gm7889-201ENSMUST00000185591 958 ntBASIC21.2■□□□□ 0.98
Foxd1Q61345 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.2■□□□□ 0.98
Foxd1Q61345 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Foxd1Q61345 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Foxd1Q61345 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Gm21814-202ENSMUST00000203277 873 ntBASIC21.19■□□□□ 0.98
Foxd1Q61345 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxd1Q61345 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.19■□□□□ 0.98
Foxd1Q61345 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Foxd1Q61345 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxd1Q61345 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxd1Q61345 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxd1Q61345 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Foxd1Q61345 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxd1Q61345 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Foxd1Q61345 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Foxd1Q61345 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Foxd1Q61345 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Foxd1Q61345 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxd1Q61345 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxd1Q61345 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxd1Q61345 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms