Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Uspl1Q3ULM6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Gm5408-201ENSMUST00000197998 747 ntBASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Uspl1Q3ULM6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Uspl1Q3ULM6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Uspl1Q3ULM6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.83■■□□□ 1.4
Uspl1Q3ULM6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Uspl1Q3ULM6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Uspl1Q3ULM6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Gm12441-201ENSMUST00000121806 588 ntBASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Uspl1Q3ULM6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC23.79■■□□□ 1.4
Uspl1Q3ULM6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Uspl1Q3ULM6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Uspl1Q3ULM6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms