Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.28■□□□□ 0.04
Trim63Q38HM4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim63Q38HM4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trim63Q38HM4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.27■□□□□ 0.04
Trim63Q38HM4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim63Q38HM4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim63Q38HM4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.26■□□□□ 0.03
Trim63Q38HM4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.26■□□□□ 0.03
Trim63Q38HM4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim63Q38HM4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.25■□□□□ 0.03
Trim63Q38HM4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim63Q38HM4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim63Q38HM4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Mir3960-201ENSMUST00000198213 73 ntBASIC15.23■□□□□ 0.03
Trim63Q38HM4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Trim63Q38HM4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim63Q38HM4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms