Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc4a4O88343 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc4a4O88343 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.74■■□□□ 1.07
Slc4a4O88343 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Slc4a4O88343 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc4a4O88343 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Slc4a4O88343 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc4a4O88343 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slc4a4O88343 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.73■■□□□ 1.07
Slc4a4O88343 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.73■■□□□ 1.07
Slc4a4O88343 Gm22325-201ENSMUST00000158904 308 ntBASIC21.73■■□□□ 1.07
Slc4a4O88343 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc4a4O88343 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc4a4O88343 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc4a4O88343 Dio3-201ENSMUST00000097228 1449 ntBASIC21.72■■□□□ 1.07
Slc4a4O88343 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc4a4O88343 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc4a4O88343 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Slc4a4O88343 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc4a4O88343 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc4a4O88343 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc4a4O88343 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc4a4O88343 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc4a4O88343 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc4a4O88343 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc4a4O88343 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc4a4O88343 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.71■■□□□ 1.07
Slc4a4O88343 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc4a4O88343 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc4a4O88343 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Slc4a4O88343 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.7■■□□□ 1.07
Slc4a4O88343 Gm2399-201ENSMUST00000104944 225 ntBASIC21.7■■□□□ 1.06
Slc4a4O88343 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.7■■□□□ 1.06
Slc4a4O88343 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.7■■□□□ 1.06
Slc4a4O88343 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc4a4O88343 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Slc4a4O88343 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Slc4a4O88343 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc4a4O88343 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.68■■□□□ 1.06
Slc4a4O88343 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Slc4a4O88343 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.68■■□□□ 1.06
Slc4a4O88343 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.68■■□□□ 1.06
Slc4a4O88343 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc4a4O88343 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc4a4O88343 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc4a4O88343 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc4a4O88343 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Slc4a4O88343 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.66■■□□□ 1.06
Slc4a4O88343 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.66■■□□□ 1.06
Slc4a4O88343 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.66■■□□□ 1.06
Slc4a4O88343 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc4a4O88343 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Slc4a4O88343 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc4a4O88343 Golph3-205ENSMUST00000228671 2842 ntBASIC21.65■■□□□ 1.06
Slc4a4O88343 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Slc4a4O88343 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc4a4O88343 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slc4a4O88343 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slc4a4O88343 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc4a4O88343 Gm11249-201ENSMUST00000117071 859 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms