Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11236J3QMS7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11236J3QMS7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Mir6349-201ENSMUST00000184059 97 ntBASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gm11236J3QMS7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11236J3QMS7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11236J3QMS7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Gm11643-201ENSMUST00000119578 864 ntBASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11236J3QMS7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Gm42545-201ENSMUST00000202755 922 ntBASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Gm21814-202ENSMUST00000203277 873 ntBASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11236J3QMS7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.27■□□□□ 0.67
Gm11236J3QMS7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Gm11236J3QMS7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm11236J3QMS7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm11236J3QMS7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Gm11236J3QMS7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms