Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.09■■□□□ 1.13
H2afb3S4R1G7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
H2afb3S4R1G7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
H2afb3S4R1G7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.07■■□□□ 1.12
H2afb3S4R1G7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
H2afb3S4R1G7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
H2afb3S4R1G7 Amer2-203ENSMUST00000225247 2662 ntBASIC22.07■■□□□ 1.12
H2afb3S4R1G7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
H2afb3S4R1G7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb3S4R1G7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb3S4R1G7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb3S4R1G7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
H2afb3S4R1G7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
H2afb3S4R1G7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
H2afb3S4R1G7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
H2afb3S4R1G7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
H2afb3S4R1G7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
H2afb3S4R1G7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
H2afb3S4R1G7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
H2afb3S4R1G7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
H2afb3S4R1G7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb3S4R1G7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb3S4R1G7 Gm16148-201ENSMUST00000119653 893 ntBASIC21.99■■□□□ 1.11
H2afb3S4R1G7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb3S4R1G7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
H2afb3S4R1G7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb3S4R1G7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb3S4R1G7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb3S4R1G7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb3S4R1G7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
H2afb3S4R1G7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb3S4R1G7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb3S4R1G7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb3S4R1G7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb3S4R1G7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb3S4R1G7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb3S4R1G7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb3S4R1G7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb3S4R1G7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
H2afb3S4R1G7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
H2afb3S4R1G7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb3S4R1G7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb3S4R1G7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb3S4R1G7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.9■■□□□ 1.1
H2afb3S4R1G7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
H2afb3S4R1G7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
H2afb3S4R1G7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.89■■□□□ 1.09
H2afb3S4R1G7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
H2afb3S4R1G7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
H2afb3S4R1G7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
H2afb3S4R1G7 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.86■■□□□ 1.09
H2afb3S4R1G7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
H2afb3S4R1G7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
H2afb3S4R1G7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.85■■□□□ 1.09
H2afb3S4R1G7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
H2afb3S4R1G7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.84■■□□□ 1.09
H2afb3S4R1G7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.83■■□□□ 1.09
H2afb3S4R1G7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
H2afb3S4R1G7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
H2afb3S4R1G7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb3S4R1G7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
H2afb3S4R1G7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb3S4R1G7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb3S4R1G7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb3S4R1G7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb3S4R1G7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
H2afb3S4R1G7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb3S4R1G7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.79■■□□□ 1.08
H2afb3S4R1G7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.79■■□□□ 1.08
H2afb3S4R1G7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb3S4R1G7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
H2afb3S4R1G7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
H2afb3S4R1G7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb3S4R1G7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb3S4R1G7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
H2afb3S4R1G7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb3S4R1G7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
H2afb3S4R1G7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
H2afb3S4R1G7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
H2afb3S4R1G7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb3S4R1G7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb3S4R1G7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb3S4R1G7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
H2afb3S4R1G7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb3S4R1G7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H2afb3S4R1G7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb3S4R1G7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.73■■□□□ 1.07
H2afb3S4R1G7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H2afb3S4R1G7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H2afb3S4R1G7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb3S4R1G7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb3S4R1G7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb3S4R1G7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
H2afb3S4R1G7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H2afb3S4R1G7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
H2afb3S4R1G7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb3S4R1G7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb3S4R1G7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb3S4R1G7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2afb3S4R1G7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms