Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.7■■■□□ 2.67
DDX49Q9Y6V7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.69■■■□□ 2.66
DDX49Q9Y6V7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.68■■■□□ 2.66
DDX49Q9Y6V7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.67■■■□□ 2.66
DDX49Q9Y6V7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
DDX49Q9Y6V7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
DDX49Q9Y6V7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX49Q9Y6V7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX49Q9Y6V7 AL162393.1-201ENST00000437852 946 ntBASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
DDX49Q9Y6V7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DDX49Q9Y6V7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
DDX49Q9Y6V7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
DDX49Q9Y6V7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
DDX49Q9Y6V7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DDX49Q9Y6V7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
DDX49Q9Y6V7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
DDX49Q9Y6V7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
DDX49Q9Y6V7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.57■■■□□ 2.64
DDX49Q9Y6V7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
DDX49Q9Y6V7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.56■■■□□ 2.64
DDX49Q9Y6V7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DDX49Q9Y6V7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DDX49Q9Y6V7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
DDX49Q9Y6V7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX49Q9Y6V7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX49Q9Y6V7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.51■■■□□ 2.63
DDX49Q9Y6V7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
DDX49Q9Y6V7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX49Q9Y6V7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX49Q9Y6V7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 AL161658.1-201ENST00000623641 1967 ntBASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.45■■■□□ 2.63
DDX49Q9Y6V7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
DDX49Q9Y6V7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.43■■■□□ 2.62
DDX49Q9Y6V7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
DDX49Q9Y6V7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
DDX49Q9Y6V7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DDX49Q9Y6V7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
DDX49Q9Y6V7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 AP006261.1-201ENST00000584783 668 ntBASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.38■■■□□ 2.61
DDX49Q9Y6V7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX49Q9Y6V7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.36■■■□□ 2.61
DDX49Q9Y6V7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.35■■■□□ 2.61
DDX49Q9Y6V7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX49Q9Y6V7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX49Q9Y6V7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
DDX49Q9Y6V7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 DUX4L28-201ENST00000623687 678 ntBASIC31.3■■■□□ 2.6
DDX49Q9Y6V7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
DDX49Q9Y6V7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
DDX49Q9Y6V7 MIR762-201ENST00000390236 83 ntBASIC31.27■■■□□ 2.6
DDX49Q9Y6V7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
DDX49Q9Y6V7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
DDX49Q9Y6V7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
DDX49Q9Y6V7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX49Q9Y6V7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DDX49Q9Y6V7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DDX49Q9Y6V7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DDX49Q9Y6V7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 AC087741.3-201ENST00000624270 1347 ntBASIC31.21■■■□□ 2.59
DDX49Q9Y6V7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.2■■■□□ 2.59
DDX49Q9Y6V7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
DDX49Q9Y6V7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.2■■■□□ 2.58
DDX49Q9Y6V7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms