Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CSNK1G3Q9Y6M4 AC108673.1-201ENST00000510422 1159 ntBASIC26.27■■□□□ 1.8
CSNK1G3Q9Y6M4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CSNK1G3Q9Y6M4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.26■■□□□ 1.79
CSNK1G3Q9Y6M4 HLA-V-202ENST00000446817 847 ntBASIC26.26■■□□□ 1.79
CSNK1G3Q9Y6M4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSNK1G3Q9Y6M4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CSNK1G3Q9Y6M4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.24■■□□□ 1.79
CSNK1G3Q9Y6M4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSNK1G3Q9Y6M4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.24■■□□□ 1.79
CSNK1G3Q9Y6M4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CSNK1G3Q9Y6M4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G3Q9Y6M4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G3Q9Y6M4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSNK1G3Q9Y6M4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CSNK1G3Q9Y6M4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.21■■□□□ 1.79
CSNK1G3Q9Y6M4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSNK1G3Q9Y6M4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.21■■□□□ 1.79
CSNK1G3Q9Y6M4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G3Q9Y6M4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G3Q9Y6M4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CSNK1G3Q9Y6M4 AC021231.2-201ENST00000594613 730 ntBASIC26.2■■□□□ 1.78
CSNK1G3Q9Y6M4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CSNK1G3Q9Y6M4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.19■■□□□ 1.78
CSNK1G3Q9Y6M4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CSNK1G3Q9Y6M4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSNK1G3Q9Y6M4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 MIR6090-201ENST00000622481 60 ntBASIC26.17■■□□□ 1.78
CSNK1G3Q9Y6M4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CSNK1G3Q9Y6M4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSNK1G3Q9Y6M4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CSNK1G3Q9Y6M4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
CSNK1G3Q9Y6M4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CSNK1G3Q9Y6M4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
CSNK1G3Q9Y6M4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CSNK1G3Q9Y6M4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CSNK1G3Q9Y6M4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.13■■□□□ 1.77
CSNK1G3Q9Y6M4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
CSNK1G3Q9Y6M4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.11■■□□□ 1.77
CSNK1G3Q9Y6M4 AC120057.4-201ENST00000624722 1615 ntBASIC26.1■■□□□ 1.77
CSNK1G3Q9Y6M4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSNK1G3Q9Y6M4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.1■■□□□ 1.77
CSNK1G3Q9Y6M4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.09■■□□□ 1.77
CSNK1G3Q9Y6M4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CSNK1G3Q9Y6M4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CSNK1G3Q9Y6M4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CSNK1G3Q9Y6M4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CSNK1G3Q9Y6M4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.06■■□□□ 1.76
CSNK1G3Q9Y6M4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CSNK1G3Q9Y6M4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CSNK1G3Q9Y6M4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSNK1G3Q9Y6M4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.02■■□□□ 1.76
CSNK1G3Q9Y6M4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSNK1G3Q9Y6M4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSNK1G3Q9Y6M4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26■■□□□ 1.75
CSNK1G3Q9Y6M4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSNK1G3Q9Y6M4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26■■□□□ 1.75
CSNK1G3Q9Y6M4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSNK1G3Q9Y6M4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.99■■□□□ 1.75
CSNK1G3Q9Y6M4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
CSNK1G3Q9Y6M4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.99■■□□□ 1.75
CSNK1G3Q9Y6M4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.99■■□□□ 1.75
CSNK1G3Q9Y6M4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSNK1G3Q9Y6M4 LINC01971-201ENST00000617888 1048 ntBASIC25.98■■□□□ 1.75
CSNK1G3Q9Y6M4 MIR639-201ENST00000384974 98 ntBASIC25.97■■□□□ 1.75
CSNK1G3Q9Y6M4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.97■■□□□ 1.75
CSNK1G3Q9Y6M4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CSNK1G3Q9Y6M4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSNK1G3Q9Y6M4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
CSNK1G3Q9Y6M4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CSNK1G3Q9Y6M4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CSNK1G3Q9Y6M4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.96■■□□□ 1.75
CSNK1G3Q9Y6M4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.95■■□□□ 1.75
CSNK1G3Q9Y6M4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.95■■□□□ 1.74
CSNK1G3Q9Y6M4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 MIR4449-201ENST00000578365 66 ntBASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 MIR3648-2-201ENST00000581792 180 ntBASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 MIR3648-1-201ENST00000615959 180 ntBASIC25.94■■□□□ 1.74
CSNK1G3Q9Y6M4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CSNK1G3Q9Y6M4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.93■■□□□ 1.74
CSNK1G3Q9Y6M4 DUX4L11-201ENST00000611504 1267 ntBASIC25.93■■□□□ 1.74
CSNK1G3Q9Y6M4 DUX4L12-201ENST00000614593 1267 ntBASIC25.93■■□□□ 1.74
CSNK1G3Q9Y6M4 DUX4L14-201ENST00000621227 1267 ntBASIC25.93■■□□□ 1.74
CSNK1G3Q9Y6M4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSNK1G3Q9Y6M4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
CSNK1G3Q9Y6M4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CSNK1G3Q9Y6M4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.92■■□□□ 1.74
CSNK1G3Q9Y6M4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CSNK1G3Q9Y6M4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CSNK1G3Q9Y6M4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.91■■□□□ 1.74
CSNK1G3Q9Y6M4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.91■■□□□ 1.74
CSNK1G3Q9Y6M4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.91■■□□□ 1.74
CSNK1G3Q9Y6M4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms