Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.68■■■□□ 2.5
PCDHA4Q9UN74 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA4Q9UN74 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA4Q9UN74 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA4Q9UN74 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA4Q9UN74 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA4Q9UN74 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.66■■■□□ 2.5
PCDHA4Q9UN74 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA4Q9UN74 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA4Q9UN74 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA4Q9UN74 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA4Q9UN74 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHA4Q9UN74 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.62■■■□□ 2.49
PCDHA4Q9UN74 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHA4Q9UN74 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.61■■■□□ 2.49
PCDHA4Q9UN74 MIR762-201ENST00000390236 83 ntBASIC30.61■■■□□ 2.49
PCDHA4Q9UN74 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.59■■■□□ 2.49
PCDHA4Q9UN74 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA4Q9UN74 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA4Q9UN74 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA4Q9UN74 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.49
PCDHA4Q9UN74 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.57■■■□□ 2.48
PCDHA4Q9UN74 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA4Q9UN74 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA4Q9UN74 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA4Q9UN74 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA4Q9UN74 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
PCDHA4Q9UN74 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHA4Q9UN74 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDHA4Q9UN74 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA4Q9UN74 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA4Q9UN74 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHA4Q9UN74 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHA4Q9UN74 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
PCDHA4Q9UN74 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA4Q9UN74 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA4Q9UN74 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.49■■■□□ 2.47
PCDHA4Q9UN74 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA4Q9UN74 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHA4Q9UN74 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PCDHA4Q9UN74 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.47■■■□□ 2.47
PCDHA4Q9UN74 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
PCDHA4Q9UN74 AC005559.1-201ENST00000589661 871 ntBASIC30.45■■■□□ 2.47
PCDHA4Q9UN74 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
PCDHA4Q9UN74 AL135925.1-201ENST00000605920 1701 ntBASIC30.44■■■□□ 2.46
PCDHA4Q9UN74 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.44■■■□□ 2.46
PCDHA4Q9UN74 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHA4Q9UN74 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.41■■■□□ 2.46
PCDHA4Q9UN74 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.41■■■□□ 2.46
PCDHA4Q9UN74 AP006261.1-201ENST00000584783 668 ntBASIC30.41■■■□□ 2.46
PCDHA4Q9UN74 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.41■■■□□ 2.46
PCDHA4Q9UN74 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PCDHA4Q9UN74 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.4■■■□□ 2.46
PCDHA4Q9UN74 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHA4Q9UN74 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHA4Q9UN74 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.39■■■□□ 2.46
PCDHA4Q9UN74 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHA4Q9UN74 DUX4L28-201ENST00000623687 678 ntBASIC30.39■■■□□ 2.46
PCDHA4Q9UN74 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.38■■■□□ 2.45
PCDHA4Q9UN74 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
PCDHA4Q9UN74 MIR3665-201ENST00000578708 105 ntBASIC30.36■■■□□ 2.45
PCDHA4Q9UN74 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
PCDHA4Q9UN74 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCDHA4Q9UN74 ST7-AS1-201ENST00000456775 1889 ntBASIC30.35■■■□□ 2.45
PCDHA4Q9UN74 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PCDHA4Q9UN74 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.34■■■□□ 2.45
PCDHA4Q9UN74 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
PCDHA4Q9UN74 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHA4Q9UN74 AL162393.1-201ENST00000437852 946 ntBASIC30.33■■■□□ 2.45
PCDHA4Q9UN74 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.33■■■□□ 2.45
PCDHA4Q9UN74 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PCDHA4Q9UN74 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.32■■■□□ 2.44
PCDHA4Q9UN74 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
PCDHA4Q9UN74 AC010864.1-201ENST00000609407 1511 ntBASIC30.31■■■□□ 2.44
PCDHA4Q9UN74 ABCB10P1-201ENST00000614297 2181 ntBASIC30.31■■■□□ 2.44
PCDHA4Q9UN74 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
PCDHA4Q9UN74 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.29■■■□□ 2.44
PCDHA4Q9UN74 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHA4Q9UN74 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHA4Q9UN74 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHA4Q9UN74 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.28■■■□□ 2.44
PCDHA4Q9UN74 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.28■■■□□ 2.44
PCDHA4Q9UN74 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
PCDHA4Q9UN74 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.27■■■□□ 2.44
PCDHA4Q9UN74 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCDHA4Q9UN74 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCDHA4Q9UN74 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.26■■■□□ 2.43
PCDHA4Q9UN74 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PCDHA4Q9UN74 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms