Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC39.21■■■■□ 3.87
STAG3Q9UJ98 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC39.21■■■■□ 3.87
STAG3Q9UJ98 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC39.2■■■■□ 3.87
STAG3Q9UJ98 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
STAG3Q9UJ98 DUX4L11-201ENST00000611504 1267 ntBASIC39.2■■■■□ 3.87
STAG3Q9UJ98 DUX4L12-201ENST00000614593 1267 ntBASIC39.2■■■■□ 3.87
STAG3Q9UJ98 DUX4L14-201ENST00000621227 1267 ntBASIC39.2■■■■□ 3.87
STAG3Q9UJ98 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.2■■■■□ 3.87
STAG3Q9UJ98 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
STAG3Q9UJ98 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
STAG3Q9UJ98 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC39.19■■■■□ 3.86
STAG3Q9UJ98 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC39.19■■■■□ 3.86
STAG3Q9UJ98 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC39.18■■■■□ 3.86
STAG3Q9UJ98 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
STAG3Q9UJ98 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC39.17■■■■□ 3.86
STAG3Q9UJ98 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC39.16■■■■□ 3.86
STAG3Q9UJ98 AGPS-202ENST00000409888 815 ntTSL 4 BASIC39.16■■■■□ 3.86
STAG3Q9UJ98 LINC01971-201ENST00000617888 1048 ntBASIC39.16■■■■□ 3.86
STAG3Q9UJ98 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC39.16■■■■□ 3.86
STAG3Q9UJ98 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
STAG3Q9UJ98 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
STAG3Q9UJ98 CR559946.2-201ENST00000623684 991 ntBASIC39.15■■■■□ 3.86
STAG3Q9UJ98 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC39.15■■■■□ 3.86
STAG3Q9UJ98 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
STAG3Q9UJ98 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC39.13■■■■□ 3.85
STAG3Q9UJ98 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
STAG3Q9UJ98 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
STAG3Q9UJ98 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
STAG3Q9UJ98 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.1■■■■□ 3.85
STAG3Q9UJ98 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.1■■■■□ 3.85
STAG3Q9UJ98 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
STAG3Q9UJ98 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
STAG3Q9UJ98 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
STAG3Q9UJ98 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC39.06■■■■□ 3.84
STAG3Q9UJ98 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.06■■■■□ 3.84
STAG3Q9UJ98 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
STAG3Q9UJ98 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
STAG3Q9UJ98 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC39.05■■■■□ 3.84
STAG3Q9UJ98 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
STAG3Q9UJ98 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
STAG3Q9UJ98 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
STAG3Q9UJ98 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC39.03■■■■□ 3.84
STAG3Q9UJ98 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC39■■■■□ 3.83
STAG3Q9UJ98 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC38.99■■■■□ 3.83
STAG3Q9UJ98 ABHD17AP3-201ENST00000503096 1137 ntBASIC38.99■■■■□ 3.83
STAG3Q9UJ98 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
STAG3Q9UJ98 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC38.98■■■■□ 3.83
STAG3Q9UJ98 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.97■■■■□ 3.83
STAG3Q9UJ98 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC38.96■■■■□ 3.83
STAG3Q9UJ98 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
STAG3Q9UJ98 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC38.95■■■■□ 3.83
STAG3Q9UJ98 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
STAG3Q9UJ98 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
STAG3Q9UJ98 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
STAG3Q9UJ98 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
STAG3Q9UJ98 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
STAG3Q9UJ98 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
STAG3Q9UJ98 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC38.89■■■■□ 3.82
STAG3Q9UJ98 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
STAG3Q9UJ98 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC38.88■■■■□ 3.81
STAG3Q9UJ98 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
STAG3Q9UJ98 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
STAG3Q9UJ98 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
STAG3Q9UJ98 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC38.86■■■■□ 3.81
STAG3Q9UJ98 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC38.85■■■■□ 3.81
STAG3Q9UJ98 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC38.83■■■■□ 3.81
STAG3Q9UJ98 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
STAG3Q9UJ98 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.82■■■■□ 3.8
STAG3Q9UJ98 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.82■■■■□ 3.8
STAG3Q9UJ98 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.8
STAG3Q9UJ98 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
STAG3Q9UJ98 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
STAG3Q9UJ98 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC38.79■■■■□ 3.8
STAG3Q9UJ98 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC38.79■■■■□ 3.8
STAG3Q9UJ98 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC38.78■■■■□ 3.8
STAG3Q9UJ98 METRNL-202ENST00000570778 967 ntTSL 5 BASIC38.78■■■■□ 3.8
STAG3Q9UJ98 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC38.77■■■■□ 3.8
STAG3Q9UJ98 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC38.76■■■■□ 3.8
STAG3Q9UJ98 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
STAG3Q9UJ98 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
STAG3Q9UJ98 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
STAG3Q9UJ98 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
STAG3Q9UJ98 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
STAG3Q9UJ98 DUX4L13-201ENST00000554103 1267 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L15-201ENST00000611059 1267 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L23-201ENST00000615195 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L24-201ENST00000617576 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L22-201ENST00000618238 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L20-201ENST00000619712 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L21-201ENST00000622058 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L10-201ENST00000622460 1267 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 DUX4L25-201ENST00000624915 1269 ntBASIC38.72■■■■□ 3.79
STAG3Q9UJ98 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC38.7■■■■□ 3.79
STAG3Q9UJ98 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
STAG3Q9UJ98 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC38.68■■■■□ 3.78
STAG3Q9UJ98 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
STAG3Q9UJ98 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC38.68■■■■□ 3.78
STAG3Q9UJ98 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC38.67■■■■□ 3.78
STAG3Q9UJ98 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC38.67■■■■□ 3.78
STAG3Q9UJ98 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms