Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RpgrQ9R0X5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RpgrQ9R0X5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RpgrQ9R0X5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RpgrQ9R0X5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RpgrQ9R0X5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
RpgrQ9R0X5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RpgrQ9R0X5 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.63■■□□□ 1.53
RpgrQ9R0X5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RpgrQ9R0X5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RpgrQ9R0X5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.62■■□□□ 1.53
RpgrQ9R0X5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RpgrQ9R0X5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RpgrQ9R0X5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RpgrQ9R0X5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RpgrQ9R0X5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RpgrQ9R0X5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RpgrQ9R0X5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.6■■□□□ 1.53
RpgrQ9R0X5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
RpgrQ9R0X5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RpgrQ9R0X5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
RpgrQ9R0X5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RpgrQ9R0X5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RpgrQ9R0X5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RpgrQ9R0X5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RpgrQ9R0X5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RpgrQ9R0X5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RpgrQ9R0X5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RpgrQ9R0X5 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.56■■□□□ 1.52
RpgrQ9R0X5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RpgrQ9R0X5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RpgrQ9R0X5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RpgrQ9R0X5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RpgrQ9R0X5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.52■■□□□ 1.52
RpgrQ9R0X5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RpgrQ9R0X5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
RpgrQ9R0X5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RpgrQ9R0X5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.5■■□□□ 1.51
RpgrQ9R0X5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RpgrQ9R0X5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RpgrQ9R0X5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RpgrQ9R0X5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RpgrQ9R0X5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RpgrQ9R0X5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RpgrQ9R0X5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
RpgrQ9R0X5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RpgrQ9R0X5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RpgrQ9R0X5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RpgrQ9R0X5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RpgrQ9R0X5 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.43■■□□□ 1.5
RpgrQ9R0X5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RpgrQ9R0X5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RpgrQ9R0X5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RpgrQ9R0X5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RpgrQ9R0X5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RpgrQ9R0X5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
RpgrQ9R0X5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
RpgrQ9R0X5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RpgrQ9R0X5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.5
RpgrQ9R0X5 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.39■■□□□ 1.49
RpgrQ9R0X5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RpgrQ9R0X5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.38■■□□□ 1.49
RpgrQ9R0X5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RpgrQ9R0X5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RpgrQ9R0X5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RpgrQ9R0X5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RpgrQ9R0X5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RpgrQ9R0X5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RpgrQ9R0X5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RpgrQ9R0X5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RpgrQ9R0X5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RpgrQ9R0X5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RpgrQ9R0X5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RpgrQ9R0X5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RpgrQ9R0X5 Gm9397-201ENSMUST00000200125 605 ntBASIC24.33■■□□□ 1.49
RpgrQ9R0X5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RpgrQ9R0X5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RpgrQ9R0X5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RpgrQ9R0X5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RpgrQ9R0X5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RpgrQ9R0X5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RpgrQ9R0X5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RpgrQ9R0X5 Gm45855-201ENSMUST00000212546 880 ntBASIC24.31■■□□□ 1.48
RpgrQ9R0X5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RpgrQ9R0X5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.29■■□□□ 1.48
RpgrQ9R0X5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RpgrQ9R0X5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RpgrQ9R0X5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RpgrQ9R0X5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms