Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZCCHC17Q9NP64 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.48■■■□□ 2.63
ZCCHC17Q9NP64 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
ZCCHC17Q9NP64 HSD17B1P1-201ENST00000590052 955 ntBASIC31.47■■■□□ 2.63
ZCCHC17Q9NP64 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ZCCHC17Q9NP64 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.45■■■□□ 2.63
ZCCHC17Q9NP64 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ZCCHC17Q9NP64 LINC01971-201ENST00000617888 1048 ntBASIC31.44■■■□□ 2.62
ZCCHC17Q9NP64 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.43■■■□□ 2.62
ZCCHC17Q9NP64 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.43■■■□□ 2.62
ZCCHC17Q9NP64 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZCCHC17Q9NP64 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZCCHC17Q9NP64 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
ZCCHC17Q9NP64 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.42■■■□□ 2.62
ZCCHC17Q9NP64 MIR6090-201ENST00000622481 60 ntBASIC31.42■■■□□ 2.62
ZCCHC17Q9NP64 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.41■■■□□ 2.62
ZCCHC17Q9NP64 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.4■■■□□ 2.62
ZCCHC17Q9NP64 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.4■■■□□ 2.62
ZCCHC17Q9NP64 DUX4L11-201ENST00000611504 1267 ntBASIC31.4■■■□□ 2.62
ZCCHC17Q9NP64 DUX4L12-201ENST00000614593 1267 ntBASIC31.4■■■□□ 2.62
ZCCHC17Q9NP64 DUX4L14-201ENST00000621227 1267 ntBASIC31.4■■■□□ 2.62
ZCCHC17Q9NP64 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ZCCHC17Q9NP64 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ZCCHC17Q9NP64 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
ZCCHC17Q9NP64 CR559946.2-201ENST00000623684 991 ntBASIC31.38■■■□□ 2.61
ZCCHC17Q9NP64 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZCCHC17Q9NP64 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.38■■■□□ 2.61
ZCCHC17Q9NP64 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZCCHC17Q9NP64 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZCCHC17Q9NP64 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.36■■■□□ 2.61
ZCCHC17Q9NP64 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZCCHC17Q9NP64 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
ZCCHC17Q9NP64 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.36■■■□□ 2.61
ZCCHC17Q9NP64 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZCCHC17Q9NP64 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZCCHC17Q9NP64 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.34■■■□□ 2.61
ZCCHC17Q9NP64 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ZCCHC17Q9NP64 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZCCHC17Q9NP64 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZCCHC17Q9NP64 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZCCHC17Q9NP64 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZCCHC17Q9NP64 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.31■■■□□ 2.6
ZCCHC17Q9NP64 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.3■■■□□ 2.6
ZCCHC17Q9NP64 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
ZCCHC17Q9NP64 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZCCHC17Q9NP64 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.26■■■□□ 2.59
ZCCHC17Q9NP64 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZCCHC17Q9NP64 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
ZCCHC17Q9NP64 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
ZCCHC17Q9NP64 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.24■■■□□ 2.59
ZCCHC17Q9NP64 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.23■■■□□ 2.59
ZCCHC17Q9NP64 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ZCCHC17Q9NP64 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZCCHC17Q9NP64 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.21■■■□□ 2.59
ZCCHC17Q9NP64 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZCCHC17Q9NP64 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ZCCHC17Q9NP64 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZCCHC17Q9NP64 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.2■■■□□ 2.59
ZCCHC17Q9NP64 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.2■■■□□ 2.59
ZCCHC17Q9NP64 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZCCHC17Q9NP64 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.19■■■□□ 2.58
ZCCHC17Q9NP64 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZCCHC17Q9NP64 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZCCHC17Q9NP64 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ZCCHC17Q9NP64 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.16■■■□□ 2.58
ZCCHC17Q9NP64 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZCCHC17Q9NP64 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZCCHC17Q9NP64 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.15■■■□□ 2.58
ZCCHC17Q9NP64 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZCCHC17Q9NP64 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZCCHC17Q9NP64 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
ZCCHC17Q9NP64 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ZCCHC17Q9NP64 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.12■■■□□ 2.57
ZCCHC17Q9NP64 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ZCCHC17Q9NP64 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ZCCHC17Q9NP64 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.11■■■□□ 2.57
ZCCHC17Q9NP64 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ZCCHC17Q9NP64 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ZCCHC17Q9NP64 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ZCCHC17Q9NP64 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.1■■■□□ 2.57
ZCCHC17Q9NP64 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ZCCHC17Q9NP64 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.08■■■□□ 2.57
ZCCHC17Q9NP64 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.08■■■□□ 2.57
ZCCHC17Q9NP64 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.07■■■□□ 2.56
ZCCHC17Q9NP64 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L13-201ENST00000554103 1267 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L15-201ENST00000611059 1267 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L23-201ENST00000615195 1269 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L24-201ENST00000617576 1269 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L22-201ENST00000618238 1269 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L20-201ENST00000619712 1269 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L21-201ENST00000622058 1269 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L10-201ENST00000622460 1267 ntBASIC31.06■■■□□ 2.56
ZCCHC17Q9NP64 DUX4L25-201ENST00000624915 1269 ntBASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms