Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Crlf1Q9JM58 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Crlf1Q9JM58 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Crlf1Q9JM58 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Crlf1Q9JM58 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Crlf1Q9JM58 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Crlf1Q9JM58 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.45■□□□□ 0.86
Crlf1Q9JM58 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.44■□□□□ 0.86
Crlf1Q9JM58 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Crlf1Q9JM58 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Crlf1Q9JM58 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Crlf1Q9JM58 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Crlf1Q9JM58 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crlf1Q9JM58 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Crlf1Q9JM58 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Crlf1Q9JM58 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.4■□□□□ 0.86
Crlf1Q9JM58 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Crlf1Q9JM58 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Crlf1Q9JM58 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Crlf1Q9JM58 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.38■□□□□ 0.85
Crlf1Q9JM58 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Crlf1Q9JM58 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crlf1Q9JM58 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Crlf1Q9JM58 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crlf1Q9JM58 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Crlf1Q9JM58 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Crlf1Q9JM58 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Crlf1Q9JM58 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Crlf1Q9JM58 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Crlf1Q9JM58 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Crlf1Q9JM58 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Crlf1Q9JM58 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Crlf1Q9JM58 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.31■□□□□ 0.84
Crlf1Q9JM58 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Crlf1Q9JM58 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Crlf1Q9JM58 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.3■□□□□ 0.84
Crlf1Q9JM58 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Crlf1Q9JM58 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Crlf1Q9JM58 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
Crlf1Q9JM58 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Crlf1Q9JM58 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Crlf1Q9JM58 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Crlf1Q9JM58 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Crlf1Q9JM58 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Crlf1Q9JM58 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Crlf1Q9JM58 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.25■□□□□ 0.83
Crlf1Q9JM58 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Crlf1Q9JM58 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf1Q9JM58 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf1Q9JM58 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Crlf1Q9JM58 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Crlf1Q9JM58 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Crlf1Q9JM58 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Crlf1Q9JM58 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf1Q9JM58 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Crlf1Q9JM58 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.21■□□□□ 0.83
Crlf1Q9JM58 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf1Q9JM58 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf1Q9JM58 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf1Q9JM58 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Crlf1Q9JM58 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.19■□□□□ 0.82
Crlf1Q9JM58 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.18■□□□□ 0.82
Crlf1Q9JM58 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.17■□□□□ 0.82
Crlf1Q9JM58 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Crlf1Q9JM58 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Crlf1Q9JM58 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.16■□□□□ 0.82
Crlf1Q9JM58 Gm6311-201ENSMUST00000073790 878 ntBASIC20.15■□□□□ 0.82
Crlf1Q9JM58 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crlf1Q9JM58 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Crlf1Q9JM58 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crlf1Q9JM58 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Crlf1Q9JM58 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Crlf1Q9JM58 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.13■□□□□ 0.81
Crlf1Q9JM58 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Crlf1Q9JM58 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Crlf1Q9JM58 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Crlf1Q9JM58 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Crlf1Q9JM58 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Crlf1Q9JM58 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.11■□□□□ 0.81
Crlf1Q9JM58 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Crlf1Q9JM58 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Crlf1Q9JM58 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crlf1Q9JM58 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crlf1Q9JM58 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crlf1Q9JM58 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Crlf1Q9JM58 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Crlf1Q9JM58 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.09■□□□□ 0.81
Crlf1Q9JM58 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.09■□□□□ 0.81
Crlf1Q9JM58 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.09■□□□□ 0.81
Crlf1Q9JM58 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Crlf1Q9JM58 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Crlf1Q9JM58 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Crlf1Q9JM58 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crlf1Q9JM58 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.06■□□□□ 0.8
Crlf1Q9JM58 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Crlf1Q9JM58 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Crlf1Q9JM58 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.05■□□□□ 0.8
Crlf1Q9JM58 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.05■□□□□ 0.8
Crlf1Q9JM58 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crlf1Q9JM58 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms