Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rcl1Q9JJT0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.62■□□□□ 0.89
Rcl1Q9JJT0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rcl1Q9JJT0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rcl1Q9JJT0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rcl1Q9JJT0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rcl1Q9JJT0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.6■□□□□ 0.89
Rcl1Q9JJT0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rcl1Q9JJT0 Gm16148-201ENSMUST00000119653 893 ntBASIC20.59■□□□□ 0.89
Rcl1Q9JJT0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rcl1Q9JJT0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rcl1Q9JJT0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rcl1Q9JJT0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rcl1Q9JJT0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rcl1Q9JJT0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rcl1Q9JJT0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rcl1Q9JJT0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rcl1Q9JJT0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rcl1Q9JJT0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rcl1Q9JJT0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rcl1Q9JJT0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rcl1Q9JJT0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rcl1Q9JJT0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rcl1Q9JJT0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rcl1Q9JJT0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rcl1Q9JJT0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rcl1Q9JJT0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rcl1Q9JJT0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rcl1Q9JJT0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.51■□□□□ 0.87
Rcl1Q9JJT0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rcl1Q9JJT0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.5■□□□□ 0.87
Rcl1Q9JJT0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rcl1Q9JJT0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Rcl1Q9JJT0 Zfp131-205ENSMUST00000223812 663 ntBASIC20.49■□□□□ 0.87
Rcl1Q9JJT0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rcl1Q9JJT0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rcl1Q9JJT0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Rcl1Q9JJT0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rcl1Q9JJT0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rcl1Q9JJT0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rcl1Q9JJT0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rcl1Q9JJT0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rcl1Q9JJT0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rcl1Q9JJT0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rcl1Q9JJT0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rcl1Q9JJT0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.45■□□□□ 0.86
Rcl1Q9JJT0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.44■□□□□ 0.86
Rcl1Q9JJT0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rcl1Q9JJT0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.44■□□□□ 0.86
Rcl1Q9JJT0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rcl1Q9JJT0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rcl1Q9JJT0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.43■□□□□ 0.86
Rcl1Q9JJT0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rcl1Q9JJT0 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.42■□□□□ 0.86
Rcl1Q9JJT0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rcl1Q9JJT0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rcl1Q9JJT0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rcl1Q9JJT0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rcl1Q9JJT0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rcl1Q9JJT0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rcl1Q9JJT0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rcl1Q9JJT0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Rcl1Q9JJT0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rcl1Q9JJT0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rcl1Q9JJT0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.38■□□□□ 0.85
Rcl1Q9JJT0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rcl1Q9JJT0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rcl1Q9JJT0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcl1Q9JJT0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcl1Q9JJT0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Rcl1Q9JJT0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rcl1Q9JJT0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rcl1Q9JJT0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rcl1Q9JJT0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcl1Q9JJT0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rcl1Q9JJT0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcl1Q9JJT0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rcl1Q9JJT0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rcl1Q9JJT0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rcl1Q9JJT0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rcl1Q9JJT0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.33■□□□□ 0.85
Rcl1Q9JJT0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rcl1Q9JJT0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.32■□□□□ 0.84
Rcl1Q9JJT0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rcl1Q9JJT0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rcl1Q9JJT0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rcl1Q9JJT0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rcl1Q9JJT0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rcl1Q9JJT0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rcl1Q9JJT0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rcl1Q9JJT0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.28■□□□□ 0.84
Rcl1Q9JJT0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.27■□□□□ 0.84
Rcl1Q9JJT0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rcl1Q9JJT0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.26■□□□□ 0.83
Rcl1Q9JJT0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms