Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
SH2D4AQ9H788 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SH2D4AQ9H788 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SH2D4AQ9H788 AC108673.1-201ENST00000510422 1159 ntBASIC31.32■■■□□ 2.6
SH2D4AQ9H788 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SH2D4AQ9H788 DUX4L29-201ENST00000425409 679 ntBASIC31.31■■■□□ 2.6
SH2D4AQ9H788 ZNRF2P2-203ENST00000454624 420 ntBASIC31.31■■■□□ 2.6
SH2D4AQ9H788 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.31■■■□□ 2.6
SH2D4AQ9H788 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.3■■■□□ 2.6
SH2D4AQ9H788 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.3■■■□□ 2.6
SH2D4AQ9H788 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SH2D4AQ9H788 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.28■■■□□ 2.6
SH2D4AQ9H788 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
SH2D4AQ9H788 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
SH2D4AQ9H788 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
SH2D4AQ9H788 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SH2D4AQ9H788 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.23■■■□□ 2.59
SH2D4AQ9H788 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.23■■■□□ 2.59
SH2D4AQ9H788 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.21■■■□□ 2.59
SH2D4AQ9H788 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.21■■■□□ 2.59
SH2D4AQ9H788 MIR6090-201ENST00000622481 60 ntBASIC31.19■■■□□ 2.58
SH2D4AQ9H788 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SH2D4AQ9H788 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SH2D4AQ9H788 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SH2D4AQ9H788 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.18■■■□□ 2.58
SH2D4AQ9H788 AC021231.2-201ENST00000594613 730 ntBASIC31.18■■■□□ 2.58
SH2D4AQ9H788 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SH2D4AQ9H788 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SH2D4AQ9H788 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
SH2D4AQ9H788 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SH2D4AQ9H788 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SH2D4AQ9H788 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SH2D4AQ9H788 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SH2D4AQ9H788 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.12■■■□□ 2.57
SH2D4AQ9H788 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH2D4AQ9H788 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH2D4AQ9H788 HLA-V-202ENST00000446817 847 ntBASIC31.11■■■□□ 2.57
SH2D4AQ9H788 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SH2D4AQ9H788 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SH2D4AQ9H788 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.09■■■□□ 2.57
SH2D4AQ9H788 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SH2D4AQ9H788 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH2D4AQ9H788 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SH2D4AQ9H788 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.07■■■□□ 2.56
SH2D4AQ9H788 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.06■■■□□ 2.56
SH2D4AQ9H788 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SH2D4AQ9H788 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
SH2D4AQ9H788 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
SH2D4AQ9H788 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SH2D4AQ9H788 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH2D4AQ9H788 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.02■■■□□ 2.56
SH2D4AQ9H788 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
SH2D4AQ9H788 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.01■■■□□ 2.55
SH2D4AQ9H788 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH2D4AQ9H788 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH2D4AQ9H788 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31■■■□□ 2.55
SH2D4AQ9H788 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SH2D4AQ9H788 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH2D4AQ9H788 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH2D4AQ9H788 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
SH2D4AQ9H788 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
SH2D4AQ9H788 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SH2D4AQ9H788 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SH2D4AQ9H788 AL161658.1-201ENST00000623641 1967 ntBASIC30.94■■■□□ 2.54
SH2D4AQ9H788 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH2D4AQ9H788 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms