Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
KCNF1Q9H3M0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.43■■■□□ 2.3
KCNF1Q9H3M0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNF1Q9H3M0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
KCNF1Q9H3M0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KCNF1Q9H3M0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.4■■■□□ 2.3
KCNF1Q9H3M0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNF1Q9H3M0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.4■■■□□ 2.3
KCNF1Q9H3M0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNF1Q9H3M0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.39■■■□□ 2.3
KCNF1Q9H3M0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
KCNF1Q9H3M0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
KCNF1Q9H3M0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNF1Q9H3M0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNF1Q9H3M0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
KCNF1Q9H3M0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNF1Q9H3M0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNF1Q9H3M0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNF1Q9H3M0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
KCNF1Q9H3M0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNF1Q9H3M0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.31■■■□□ 2.28
KCNF1Q9H3M0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
KCNF1Q9H3M0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.31■■■□□ 2.28
KCNF1Q9H3M0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
KCNF1Q9H3M0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
KCNF1Q9H3M0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNF1Q9H3M0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNF1Q9H3M0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNF1Q9H3M0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNF1Q9H3M0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNF1Q9H3M0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNF1Q9H3M0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNF1Q9H3M0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
KCNF1Q9H3M0 AL121749.1-202ENST00000609313 2153 ntBASIC29.26■■■□□ 2.27
KCNF1Q9H3M0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KCNF1Q9H3M0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNF1Q9H3M0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KCNF1Q9H3M0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.24■■■□□ 2.27
KCNF1Q9H3M0 AL135925.1-201ENST00000605920 1701 ntBASIC29.23■■■□□ 2.27
KCNF1Q9H3M0 AC135731.1-201ENST00000569415 2548 ntBASIC29.23■■■□□ 2.27
KCNF1Q9H3M0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KCNF1Q9H3M0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
KCNF1Q9H3M0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
KCNF1Q9H3M0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
KCNF1Q9H3M0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
KCNF1Q9H3M0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.2■■■□□ 2.26
KCNF1Q9H3M0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
KCNF1Q9H3M0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
KCNF1Q9H3M0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
KCNF1Q9H3M0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
KCNF1Q9H3M0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
KCNF1Q9H3M0 DRD5P2-201ENST00000421395 2012 ntBASIC29.15■■■□□ 2.26
KCNF1Q9H3M0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
KCNF1Q9H3M0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.14■■■□□ 2.26
KCNF1Q9H3M0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
KCNF1Q9H3M0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.13■■■□□ 2.25
KCNF1Q9H3M0 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.13■■■□□ 2.25
KCNF1Q9H3M0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
KCNF1Q9H3M0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
KCNF1Q9H3M0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.12■■■□□ 2.25
KCNF1Q9H3M0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
KCNF1Q9H3M0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
KCNF1Q9H3M0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
KCNF1Q9H3M0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.09■■■□□ 2.25
KCNF1Q9H3M0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
KCNF1Q9H3M0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
KCNF1Q9H3M0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.24
KCNF1Q9H3M0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
KCNF1Q9H3M0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
KCNF1Q9H3M0 AL139393.2-201ENST00000608721 2025 ntBASIC29.06■■■□□ 2.24
KCNF1Q9H3M0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
KCNF1Q9H3M0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
KCNF1Q9H3M0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.05■■■□□ 2.24
KCNF1Q9H3M0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
KCNF1Q9H3M0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
KCNF1Q9H3M0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
KCNF1Q9H3M0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.04■■■□□ 2.24
KCNF1Q9H3M0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
KCNF1Q9H3M0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNF1Q9H3M0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
KCNF1Q9H3M0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
KCNF1Q9H3M0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
KCNF1Q9H3M0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
KCNF1Q9H3M0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
KCNF1Q9H3M0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29■■■□□ 2.23
KCNF1Q9H3M0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29■■■□□ 2.23
KCNF1Q9H3M0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29■■■□□ 2.23
KCNF1Q9H3M0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
KCNF1Q9H3M0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29■■■□□ 2.23
KCNF1Q9H3M0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
KCNF1Q9H3M0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.99■■■□□ 2.23
KCNF1Q9H3M0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
KCNF1Q9H3M0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.98■■■□□ 2.23
KCNF1Q9H3M0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.97■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms