Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.34■■□□□ 1.33
CXXC4Q9H2H0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CXXC4Q9H2H0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CXXC4Q9H2H0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CXXC4Q9H2H0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CXXC4Q9H2H0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.31■■□□□ 1.32
CXXC4Q9H2H0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CXXC4Q9H2H0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CXXC4Q9H2H0 DUX4L29-201ENST00000425409 679 ntBASIC23.3■■□□□ 1.32
CXXC4Q9H2H0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CXXC4Q9H2H0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CXXC4Q9H2H0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.28■■□□□ 1.32
CXXC4Q9H2H0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.28■■□□□ 1.32
CXXC4Q9H2H0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CXXC4Q9H2H0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CXXC4Q9H2H0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CXXC4Q9H2H0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CXXC4Q9H2H0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CXXC4Q9H2H0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CXXC4Q9H2H0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CXXC4Q9H2H0 HSD17B1P1-201ENST00000590052 955 ntBASIC23.25■■□□□ 1.31
CXXC4Q9H2H0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CXXC4Q9H2H0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CXXC4Q9H2H0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CXXC4Q9H2H0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CXXC4Q9H2H0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.23■■□□□ 1.31
CXXC4Q9H2H0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CXXC4Q9H2H0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CXXC4Q9H2H0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CXXC4Q9H2H0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.22■■□□□ 1.31
CXXC4Q9H2H0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.21■■□□□ 1.31
CXXC4Q9H2H0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CXXC4Q9H2H0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CXXC4Q9H2H0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CXXC4Q9H2H0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CXXC4Q9H2H0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CXXC4Q9H2H0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CXXC4Q9H2H0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.17■■□□□ 1.3
CXXC4Q9H2H0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CXXC4Q9H2H0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.16■■□□□ 1.3
CXXC4Q9H2H0 MIR3648-2-201ENST00000581792 180 ntBASIC23.15■■□□□ 1.3
CXXC4Q9H2H0 MIR3648-1-201ENST00000615959 180 ntBASIC23.15■■□□□ 1.3
CXXC4Q9H2H0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.15■■□□□ 1.3
CXXC4Q9H2H0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CXXC4Q9H2H0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.14■■□□□ 1.29
CXXC4Q9H2H0 AC021231.2-201ENST00000594613 730 ntBASIC23.14■■□□□ 1.29
CXXC4Q9H2H0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CXXC4Q9H2H0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CXXC4Q9H2H0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CXXC4Q9H2H0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.13■■□□□ 1.29
CXXC4Q9H2H0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.13■■□□□ 1.29
CXXC4Q9H2H0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CXXC4Q9H2H0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CXXC4Q9H2H0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CXXC4Q9H2H0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.11■■□□□ 1.29
CXXC4Q9H2H0 AC016575.1-201ENST00000607026 382 ntBASIC23.11■■□□□ 1.29
CXXC4Q9H2H0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.11■■□□□ 1.29
CXXC4Q9H2H0 WASH5P-204ENST00000632292 975 ntBASIC23.11■■□□□ 1.29
CXXC4Q9H2H0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CXXC4Q9H2H0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CXXC4Q9H2H0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CXXC4Q9H2H0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CXXC4Q9H2H0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CXXC4Q9H2H0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CXXC4Q9H2H0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.06■■□□□ 1.28
CXXC4Q9H2H0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CXXC4Q9H2H0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.05■■□□□ 1.28
CXXC4Q9H2H0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.04■■□□□ 1.28
CXXC4Q9H2H0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CXXC4Q9H2H0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CXXC4Q9H2H0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.04■■□□□ 1.28
CXXC4Q9H2H0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CXXC4Q9H2H0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.02■■□□□ 1.28
CXXC4Q9H2H0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.02■■□□□ 1.28
CXXC4Q9H2H0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CXXC4Q9H2H0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23■■□□□ 1.27
CXXC4Q9H2H0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23■■□□□ 1.27
CXXC4Q9H2H0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
CXXC4Q9H2H0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CXXC4Q9H2H0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CXXC4Q9H2H0 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.99■■□□□ 1.27
CXXC4Q9H2H0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.99■■□□□ 1.27
CXXC4Q9H2H0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CXXC4Q9H2H0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CXXC4Q9H2H0 CR559946.2-201ENST00000623684 991 ntBASIC22.98■■□□□ 1.27
CXXC4Q9H2H0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CXXC4Q9H2H0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CXXC4Q9H2H0 DUX4L11-201ENST00000611504 1267 ntBASIC22.96■■□□□ 1.27
CXXC4Q9H2H0 DUX4L12-201ENST00000614593 1267 ntBASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms