Protein–RNA interactions for Protein: Q9H2B2

SYT4, Synaptotagmin-4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYT4Q9H2B2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYT4Q9H2B2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYT4Q9H2B2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYT4Q9H2B2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYT4Q9H2B2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYT4Q9H2B2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYT4Q9H2B2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYT4Q9H2B2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYT4Q9H2B2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYT4Q9H2B2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYT4Q9H2B2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYT4Q9H2B2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYT4Q9H2B2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYT4Q9H2B2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.77■■□□□ 1.4
SYT4Q9H2B2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYT4Q9H2B2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SYT4Q9H2B2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYT4Q9H2B2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SYT4Q9H2B2 RARRES2P7-201ENST00000567349 469 ntBASIC23.75■■□□□ 1.39
SYT4Q9H2B2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYT4Q9H2B2 AC139426.1-201ENST00000568218 2529 ntBASIC23.75■■□□□ 1.39
SYT4Q9H2B2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.74■■□□□ 1.39
SYT4Q9H2B2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYT4Q9H2B2 AL135925.1-201ENST00000605920 1701 ntBASIC23.73■■□□□ 1.39
SYT4Q9H2B2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SYT4Q9H2B2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SYT4Q9H2B2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYT4Q9H2B2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYT4Q9H2B2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.71■■□□□ 1.39
SYT4Q9H2B2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SYT4Q9H2B2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SYT4Q9H2B2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SYT4Q9H2B2 SETD8P1-201ENST00000623146 1180 ntBASIC23.69■■□□□ 1.38
SYT4Q9H2B2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SYT4Q9H2B2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYT4Q9H2B2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYT4Q9H2B2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYT4Q9H2B2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYT4Q9H2B2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYT4Q9H2B2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYT4Q9H2B2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SYT4Q9H2B2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
SYT4Q9H2B2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYT4Q9H2B2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.62■■□□□ 1.37
SYT4Q9H2B2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.62■■□□□ 1.37
SYT4Q9H2B2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYT4Q9H2B2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SYT4Q9H2B2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SYT4Q9H2B2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SYT4Q9H2B2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYT4Q9H2B2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SYT4Q9H2B2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
SYT4Q9H2B2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SYT4Q9H2B2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYT4Q9H2B2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SYT4Q9H2B2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SYT4Q9H2B2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYT4Q9H2B2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYT4Q9H2B2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYT4Q9H2B2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SYT4Q9H2B2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.56■■□□□ 1.36
SYT4Q9H2B2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.55■■□□□ 1.36
SYT4Q9H2B2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.55■■□□□ 1.36
SYT4Q9H2B2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SYT4Q9H2B2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYT4Q9H2B2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYT4Q9H2B2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
SYT4Q9H2B2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.53■■□□□ 1.36
SYT4Q9H2B2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYT4Q9H2B2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYT4Q9H2B2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.52■■□□□ 1.36
SYT4Q9H2B2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SYT4Q9H2B2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SYT4Q9H2B2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SYT4Q9H2B2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYT4Q9H2B2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYT4Q9H2B2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
SYT4Q9H2B2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SYT4Q9H2B2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SYT4Q9H2B2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SYT4Q9H2B2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.47■■□□□ 1.35
SYT4Q9H2B2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
SYT4Q9H2B2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms