Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC16.06■□□□□ 0.16
CYSTM1Q9H1C7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYSTM1Q9H1C7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CYSTM1Q9H1C7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYSTM1Q9H1C7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CYSTM1Q9H1C7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYSTM1Q9H1C7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CYSTM1Q9H1C7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CYSTM1Q9H1C7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CYSTM1Q9H1C7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CYSTM1Q9H1C7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CYSTM1Q9H1C7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CYSTM1Q9H1C7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CYSTM1Q9H1C7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CYSTM1Q9H1C7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CYSTM1Q9H1C7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CYSTM1Q9H1C7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CYSTM1Q9H1C7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYSTM1Q9H1C7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CYSTM1Q9H1C7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC16.02■□□□□ 0.16
CYSTM1Q9H1C7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CYSTM1Q9H1C7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC16.02■□□□□ 0.15
CYSTM1Q9H1C7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CYSTM1Q9H1C7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CYSTM1Q9H1C7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16■□□□□ 0.15
CYSTM1Q9H1C7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CYSTM1Q9H1C7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CYSTM1Q9H1C7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 AC142086.6-201ENST00000621154 1765 ntBASIC15.97■□□□□ 0.15
CYSTM1Q9H1C7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CYSTM1Q9H1C7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.95■□□□□ 0.14
CYSTM1Q9H1C7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.95■□□□□ 0.14
CYSTM1Q9H1C7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CYSTM1Q9H1C7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CYSTM1Q9H1C7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CYSTM1Q9H1C7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CYSTM1Q9H1C7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC15.93■□□□□ 0.14
CYSTM1Q9H1C7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CYSTM1Q9H1C7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CYSTM1Q9H1C7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CYSTM1Q9H1C7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CYSTM1Q9H1C7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYSTM1Q9H1C7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYSTM1Q9H1C7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CYSTM1Q9H1C7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CYSTM1Q9H1C7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CYSTM1Q9H1C7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CYSTM1Q9H1C7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CYSTM1Q9H1C7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CYSTM1Q9H1C7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CYSTM1Q9H1C7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CYSTM1Q9H1C7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CYSTM1Q9H1C7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CYSTM1Q9H1C7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CYSTM1Q9H1C7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CYSTM1Q9H1C7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CYSTM1Q9H1C7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CYSTM1Q9H1C7 AC093323.1-202ENST00000635031 2045 ntBASIC15.85■□□□□ 0.13
CYSTM1Q9H1C7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CYSTM1Q9H1C7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CYSTM1Q9H1C7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYSTM1Q9H1C7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CYSTM1Q9H1C7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYSTM1Q9H1C7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYSTM1Q9H1C7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYSTM1Q9H1C7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC15.8■□□□□ 0.12
CYSTM1Q9H1C7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CYSTM1Q9H1C7 AL449106.1-201ENST00000608517 1980 ntBASIC15.8■□□□□ 0.12
CYSTM1Q9H1C7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms