Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShpkQ9D5J6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShpkQ9D5J6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShpkQ9D5J6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShpkQ9D5J6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ShpkQ9D5J6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShpkQ9D5J6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ShpkQ9D5J6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ShpkQ9D5J6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
ShpkQ9D5J6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShpkQ9D5J6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShpkQ9D5J6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShpkQ9D5J6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShpkQ9D5J6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShpkQ9D5J6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShpkQ9D5J6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShpkQ9D5J6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ShpkQ9D5J6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShpkQ9D5J6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShpkQ9D5J6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShpkQ9D5J6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ShpkQ9D5J6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ShpkQ9D5J6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ShpkQ9D5J6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.52■□□□□ 0.88
ShpkQ9D5J6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.52■□□□□ 0.88
ShpkQ9D5J6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ShpkQ9D5J6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShpkQ9D5J6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShpkQ9D5J6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShpkQ9D5J6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.46■□□□□ 0.87
ShpkQ9D5J6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ShpkQ9D5J6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ShpkQ9D5J6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShpkQ9D5J6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ShpkQ9D5J6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShpkQ9D5J6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShpkQ9D5J6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShpkQ9D5J6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShpkQ9D5J6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShpkQ9D5J6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.44■□□□□ 0.86
ShpkQ9D5J6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShpkQ9D5J6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShpkQ9D5J6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.43■□□□□ 0.86
ShpkQ9D5J6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShpkQ9D5J6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShpkQ9D5J6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShpkQ9D5J6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
ShpkQ9D5J6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShpkQ9D5J6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShpkQ9D5J6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ShpkQ9D5J6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ShpkQ9D5J6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShpkQ9D5J6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ShpkQ9D5J6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ShpkQ9D5J6 Gm25238-201ENSMUST00000174914 89 ntBASIC20.39■□□□□ 0.85
ShpkQ9D5J6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ShpkQ9D5J6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShpkQ9D5J6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShpkQ9D5J6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ShpkQ9D5J6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShpkQ9D5J6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShpkQ9D5J6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShpkQ9D5J6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.37■□□□□ 0.85
ShpkQ9D5J6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShpkQ9D5J6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShpkQ9D5J6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShpkQ9D5J6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShpkQ9D5J6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShpkQ9D5J6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShpkQ9D5J6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ShpkQ9D5J6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ShpkQ9D5J6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShpkQ9D5J6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShpkQ9D5J6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.32■□□□□ 0.84
ShpkQ9D5J6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ShpkQ9D5J6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShpkQ9D5J6 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.3■□□□□ 0.84
ShpkQ9D5J6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ShpkQ9D5J6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShpkQ9D5J6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ShpkQ9D5J6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShpkQ9D5J6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShpkQ9D5J6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShpkQ9D5J6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.28■□□□□ 0.84
ShpkQ9D5J6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShpkQ9D5J6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShpkQ9D5J6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.27■□□□□ 0.84
ShpkQ9D5J6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ShpkQ9D5J6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShpkQ9D5J6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms