Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rita1Q9D1H0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rita1Q9D1H0 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.21■■□□□ 1.31
Rita1Q9D1H0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rita1Q9D1H0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rita1Q9D1H0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.2■■□□□ 1.3
Rita1Q9D1H0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rita1Q9D1H0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Rita1Q9D1H0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Rita1Q9D1H0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rita1Q9D1H0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rita1Q9D1H0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rita1Q9D1H0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rita1Q9D1H0 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.17■■□□□ 1.3
Rita1Q9D1H0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.17■■□□□ 1.3
Rita1Q9D1H0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rita1Q9D1H0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rita1Q9D1H0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rita1Q9D1H0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rita1Q9D1H0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rita1Q9D1H0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rita1Q9D1H0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rita1Q9D1H0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rita1Q9D1H0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rita1Q9D1H0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rita1Q9D1H0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rita1Q9D1H0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rita1Q9D1H0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rita1Q9D1H0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rita1Q9D1H0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.07■■□□□ 1.28
Rita1Q9D1H0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rita1Q9D1H0 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.06■■□□□ 1.28
Rita1Q9D1H0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rita1Q9D1H0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rita1Q9D1H0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rita1Q9D1H0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rita1Q9D1H0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rita1Q9D1H0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rita1Q9D1H0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rita1Q9D1H0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rita1Q9D1H0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rita1Q9D1H0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23■■□□□ 1.27
Rita1Q9D1H0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rita1Q9D1H0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rita1Q9D1H0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rita1Q9D1H0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.98■■□□□ 1.27
Rita1Q9D1H0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.97■■□□□ 1.27
Rita1Q9D1H0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rita1Q9D1H0 Zxda-201ENSMUST00000117281 2621 ntBASIC22.95■■□□□ 1.26
Rita1Q9D1H0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rita1Q9D1H0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rita1Q9D1H0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rita1Q9D1H0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rita1Q9D1H0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rita1Q9D1H0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rita1Q9D1H0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rita1Q9D1H0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Rita1Q9D1H0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.9■■□□□ 1.26
Rita1Q9D1H0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Rita1Q9D1H0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rita1Q9D1H0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.9■■□□□ 1.26
Rita1Q9D1H0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.89■■□□□ 1.26
Rita1Q9D1H0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rita1Q9D1H0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rita1Q9D1H0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.87■■□□□ 1.25
Rita1Q9D1H0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rita1Q9D1H0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Rita1Q9D1H0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rita1Q9D1H0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Rita1Q9D1H0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rita1Q9D1H0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rita1Q9D1H0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Rita1Q9D1H0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Rita1Q9D1H0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rita1Q9D1H0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rita1Q9D1H0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rita1Q9D1H0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rita1Q9D1H0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.81■■□□□ 1.24
Rita1Q9D1H0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rita1Q9D1H0 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.8■■□□□ 1.24
Rita1Q9D1H0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rita1Q9D1H0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.8■■□□□ 1.24
Rita1Q9D1H0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rita1Q9D1H0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rita1Q9D1H0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.79■■□□□ 1.24
Rita1Q9D1H0 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.78■■□□□ 1.24
Rita1Q9D1H0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rita1Q9D1H0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rita1Q9D1H0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rita1Q9D1H0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms