Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC33.16■■■□□ 2.9
RTFDC1Q9BY42 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.16■■■□□ 2.9
RTFDC1Q9BY42 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RTFDC1Q9BY42 MIR3648-2-201ENST00000581792 180 ntBASIC33.14■■■□□ 2.9
RTFDC1Q9BY42 MIR3648-1-201ENST00000615959 180 ntBASIC33.14■■■□□ 2.9
RTFDC1Q9BY42 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
RTFDC1Q9BY42 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.13■■■□□ 2.89
RTFDC1Q9BY42 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
RTFDC1Q9BY42 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
RTFDC1Q9BY42 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.11■■■□□ 2.89
RTFDC1Q9BY42 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
RTFDC1Q9BY42 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.09■■■□□ 2.89
RTFDC1Q9BY42 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
RTFDC1Q9BY42 AC016575.1-201ENST00000607026 382 ntBASIC33.08■■■□□ 2.89
RTFDC1Q9BY42 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.07■■■□□ 2.88
RTFDC1Q9BY42 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RTFDC1Q9BY42 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.05■■■□□ 2.88
RTFDC1Q9BY42 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
RTFDC1Q9BY42 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.04■■■□□ 2.88
RTFDC1Q9BY42 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RTFDC1Q9BY42 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.03■■■□□ 2.88
RTFDC1Q9BY42 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RTFDC1Q9BY42 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RTFDC1Q9BY42 LINC01971-201ENST00000617888 1048 ntBASIC33.03■■■□□ 2.88
RTFDC1Q9BY42 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RTFDC1Q9BY42 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RTFDC1Q9BY42 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RTFDC1Q9BY42 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
RTFDC1Q9BY42 DUX4L11-201ENST00000611504 1267 ntBASIC33.01■■■□□ 2.87
RTFDC1Q9BY42 DUX4L12-201ENST00000614593 1267 ntBASIC33.01■■■□□ 2.87
RTFDC1Q9BY42 DUX4L14-201ENST00000621227 1267 ntBASIC33.01■■■□□ 2.87
RTFDC1Q9BY42 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33■■■□□ 2.87
RTFDC1Q9BY42 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.99■■■□□ 2.87
RTFDC1Q9BY42 CR559946.2-201ENST00000623684 991 ntBASIC32.99■■■□□ 2.87
RTFDC1Q9BY42 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
RTFDC1Q9BY42 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.98■■■□□ 2.87
RTFDC1Q9BY42 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.97■■■□□ 2.87
RTFDC1Q9BY42 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
RTFDC1Q9BY42 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.96■■■□□ 2.87
RTFDC1Q9BY42 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
RTFDC1Q9BY42 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.95■■■□□ 2.87
RTFDC1Q9BY42 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
RTFDC1Q9BY42 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
RTFDC1Q9BY42 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTFDC1Q9BY42 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.93■■■□□ 2.86
RTFDC1Q9BY42 HSD17B1P1-201ENST00000590052 955 ntBASIC32.92■■■□□ 2.86
RTFDC1Q9BY42 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.92■■■□□ 2.86
RTFDC1Q9BY42 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RTFDC1Q9BY42 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RTFDC1Q9BY42 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
RTFDC1Q9BY42 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
RTFDC1Q9BY42 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RTFDC1Q9BY42 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
RTFDC1Q9BY42 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RTFDC1Q9BY42 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
RTFDC1Q9BY42 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
RTFDC1Q9BY42 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RTFDC1Q9BY42 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
RTFDC1Q9BY42 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RTFDC1Q9BY42 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.86■■■□□ 2.85
RTFDC1Q9BY42 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RTFDC1Q9BY42 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.84■■■□□ 2.85
RTFDC1Q9BY42 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RTFDC1Q9BY42 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RTFDC1Q9BY42 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RTFDC1Q9BY42 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RTFDC1Q9BY42 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.83■■■□□ 2.85
RTFDC1Q9BY42 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.83■■■□□ 2.85
RTFDC1Q9BY42 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.83■■■□□ 2.85
RTFDC1Q9BY42 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.82■■■□□ 2.84
RTFDC1Q9BY42 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RTFDC1Q9BY42 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RTFDC1Q9BY42 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.81■■■□□ 2.84
RTFDC1Q9BY42 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RTFDC1Q9BY42 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.79■■■□□ 2.84
RTFDC1Q9BY42 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
RTFDC1Q9BY42 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RTFDC1Q9BY42 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
RTFDC1Q9BY42 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
RTFDC1Q9BY42 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
RTFDC1Q9BY42 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.75■■■□□ 2.83
RTFDC1Q9BY42 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.75■■■□□ 2.83
RTFDC1Q9BY42 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTFDC1Q9BY42 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTFDC1Q9BY42 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RTFDC1Q9BY42 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
RTFDC1Q9BY42 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
RTFDC1Q9BY42 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
RTFDC1Q9BY42 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.71■■■□□ 2.83
RTFDC1Q9BY42 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RTFDC1Q9BY42 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.69■■■□□ 2.82
RTFDC1Q9BY42 DUX4L13-201ENST00000554103 1267 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L15-201ENST00000611059 1267 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L23-201ENST00000615195 1269 ntBASIC32.68■■■□□ 2.82
RTFDC1Q9BY42 DUX4L24-201ENST00000617576 1269 ntBASIC32.68■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms