Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDH15Q96QU1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.58■■□□□ 1.85
PCDH15Q96QU1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
PCDH15Q96QU1 AC108673.1-201ENST00000510422 1159 ntBASIC26.57■■□□□ 1.84
PCDH15Q96QU1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
PCDH15Q96QU1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
PCDH15Q96QU1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDH15Q96QU1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDH15Q96QU1 MIR6090-201ENST00000622481 60 ntBASIC26.55■■□□□ 1.84
PCDH15Q96QU1 HSD17B1P1-201ENST00000590052 955 ntBASIC26.54■■□□□ 1.84
PCDH15Q96QU1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDH15Q96QU1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.53■■□□□ 1.84
PCDH15Q96QU1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDH15Q96QU1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.53■■□□□ 1.84
PCDH15Q96QU1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDH15Q96QU1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDH15Q96QU1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDH15Q96QU1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.51■■□□□ 1.83
PCDH15Q96QU1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDH15Q96QU1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
PCDH15Q96QU1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH15Q96QU1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH15Q96QU1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.5■■□□□ 1.83
PCDH15Q96QU1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDH15Q96QU1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDH15Q96QU1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDH15Q96QU1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.49■■□□□ 1.83
PCDH15Q96QU1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH15Q96QU1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDH15Q96QU1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDH15Q96QU1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH15Q96QU1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.47■■□□□ 1.83
PCDH15Q96QU1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDH15Q96QU1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PCDH15Q96QU1 LINC01971-201ENST00000617888 1048 ntBASIC26.47■■□□□ 1.83
PCDH15Q96QU1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDH15Q96QU1 DUX4L11-201ENST00000611504 1267 ntBASIC26.46■■□□□ 1.83
PCDH15Q96QU1 DUX4L12-201ENST00000614593 1267 ntBASIC26.46■■□□□ 1.83
PCDH15Q96QU1 DUX4L14-201ENST00000621227 1267 ntBASIC26.46■■□□□ 1.83
PCDH15Q96QU1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
PCDH15Q96QU1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.44■■□□□ 1.82
PCDH15Q96QU1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDH15Q96QU1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDH15Q96QU1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDH15Q96QU1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PCDH15Q96QU1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH15Q96QU1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDH15Q96QU1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDH15Q96QU1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
PCDH15Q96QU1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDH15Q96QU1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDH15Q96QU1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
PCDH15Q96QU1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH15Q96QU1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH15Q96QU1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH15Q96QU1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH15Q96QU1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH15Q96QU1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDH15Q96QU1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.36■■□□□ 1.81
PCDH15Q96QU1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDH15Q96QU1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH15Q96QU1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH15Q96QU1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDH15Q96QU1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH15Q96QU1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDH15Q96QU1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH15Q96QU1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH15Q96QU1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH15Q96QU1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH15Q96QU1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH15Q96QU1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH15Q96QU1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH15Q96QU1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
PCDH15Q96QU1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH15Q96QU1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH15Q96QU1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH15Q96QU1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDH15Q96QU1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH15Q96QU1 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.25■■□□□ 1.79
PCDH15Q96QU1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH15Q96QU1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH15Q96QU1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDH15Q96QU1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH15Q96QU1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDH15Q96QU1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH15Q96QU1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDH15Q96QU1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.21■■□□□ 1.79
PCDH15Q96QU1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH15Q96QU1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH15Q96QU1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms