Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.04■□□□□ 0.8
MRPL53Q96EL3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.04■□□□□ 0.8
MRPL53Q96EL3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL53Q96EL3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MRPL53Q96EL3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL53Q96EL3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL53Q96EL3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL53Q96EL3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL53Q96EL3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MRPL53Q96EL3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.02■□□□□ 0.8
MRPL53Q96EL3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL53Q96EL3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL53Q96EL3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MRPL53Q96EL3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MRPL53Q96EL3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MRPL53Q96EL3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MRPL53Q96EL3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.01■□□□□ 0.79
MRPL53Q96EL3 WASH5P-204ENST00000632292 975 ntBASIC20.01■□□□□ 0.79
MRPL53Q96EL3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MRPL53Q96EL3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20■□□□□ 0.79
MRPL53Q96EL3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20■□□□□ 0.79
MRPL53Q96EL3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
MRPL53Q96EL3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.99■□□□□ 0.79
MRPL53Q96EL3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MRPL53Q96EL3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
MRPL53Q96EL3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MRPL53Q96EL3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.98■□□□□ 0.79
MRPL53Q96EL3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
MRPL53Q96EL3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL53Q96EL3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.97■□□□□ 0.79
MRPL53Q96EL3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL53Q96EL3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL53Q96EL3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL53Q96EL3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.96■□□□□ 0.79
MRPL53Q96EL3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL53Q96EL3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.96■□□□□ 0.79
MRPL53Q96EL3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL53Q96EL3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL53Q96EL3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL53Q96EL3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL53Q96EL3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL53Q96EL3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL53Q96EL3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL53Q96EL3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL53Q96EL3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.93■□□□□ 0.78
MRPL53Q96EL3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL53Q96EL3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL53Q96EL3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.91■□□□□ 0.78
MRPL53Q96EL3 AL133380.1-201ENST00000506013 324 ntBASIC19.91■□□□□ 0.78
MRPL53Q96EL3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.91■□□□□ 0.78
MRPL53Q96EL3 AC139426.1-201ENST00000568218 2529 ntBASIC19.9■□□□□ 0.78
MRPL53Q96EL3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MRPL53Q96EL3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MRPL53Q96EL3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MRPL53Q96EL3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.89■□□□□ 0.77
MRPL53Q96EL3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.88■□□□□ 0.77
MRPL53Q96EL3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MRPL53Q96EL3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL53Q96EL3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MRPL53Q96EL3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MRPL53Q96EL3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL53Q96EL3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MRPL53Q96EL3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL53Q96EL3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL53Q96EL3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL53Q96EL3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL53Q96EL3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.83■□□□□ 0.76
MRPL53Q96EL3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MRPL53Q96EL3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.82■□□□□ 0.76
MRPL53Q96EL3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL53Q96EL3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPL53Q96EL3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL53Q96EL3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL53Q96EL3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL53Q96EL3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL53Q96EL3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL53Q96EL3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL53Q96EL3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MRPL53Q96EL3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MRPL53Q96EL3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRPL53Q96EL3 AC142086.6-201ENST00000621154 1765 ntBASIC19.78■□□□□ 0.76
MRPL53Q96EL3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.77■□□□□ 0.76
MRPL53Q96EL3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MRPL53Q96EL3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL53Q96EL3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL53Q96EL3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRPL53Q96EL3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRPL53Q96EL3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL53Q96EL3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRPL53Q96EL3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL53Q96EL3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
MRPL53Q96EL3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.75■□□□□ 0.75
MRPL53Q96EL3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL53Q96EL3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.74■□□□□ 0.75
MRPL53Q96EL3 AL139393.2-201ENST00000608721 2025 ntBASIC19.74■□□□□ 0.75
MRPL53Q96EL3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MRPL53Q96EL3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.73■□□□□ 0.75
MRPL53Q96EL3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRPL53Q96EL3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.73■□□□□ 0.75
MRPL53Q96EL3 AC010864.1-201ENST00000609407 1511 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms