Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
ATP6V0A1Q93050 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.07■■■□□ 2.4
ATP6V0A1Q93050 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
ATP6V0A1Q93050 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.06■■■□□ 2.4
ATP6V0A1Q93050 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ATP6V0A1Q93050 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.04■■■□□ 2.4
ATP6V0A1Q93050 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.03■■■□□ 2.4
ATP6V0A1Q93050 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ATP6V0A1Q93050 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.02■■■□□ 2.4
ATP6V0A1Q93050 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.02■■■□□ 2.4
ATP6V0A1Q93050 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30■■■□□ 2.39
ATP6V0A1Q93050 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 ZNRF2P2-203ENST00000454624 420 ntBASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP6V0A1Q93050 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ATP6V0A1Q93050 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ATP6V0A1Q93050 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATP6V0A1Q93050 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.96■■■□□ 2.39
ATP6V0A1Q93050 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.95■■■□□ 2.39
ATP6V0A1Q93050 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.95■■■□□ 2.38
ATP6V0A1Q93050 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ATP6V0A1Q93050 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.93■■■□□ 2.38
ATP6V0A1Q93050 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ATP6V0A1Q93050 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ATP6V0A1Q93050 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.9■■■□□ 2.38
ATP6V0A1Q93050 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 DUX4L29-201ENST00000425409 679 ntBASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 HLA-V-202ENST00000446817 847 ntBASIC29.89■■■□□ 2.38
ATP6V0A1Q93050 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
ATP6V0A1Q93050 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.88■■■□□ 2.37
ATP6V0A1Q93050 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.87■■■□□ 2.37
ATP6V0A1Q93050 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.86■■■□□ 2.37
ATP6V0A1Q93050 AL161658.1-201ENST00000623641 1967 ntBASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.85■■■□□ 2.37
ATP6V0A1Q93050 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
ATP6V0A1Q93050 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.84■■■□□ 2.37
ATP6V0A1Q93050 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP6V0A1Q93050 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ATP6V0A1Q93050 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A1Q93050 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ATP6V0A1Q93050 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP6V0A1Q93050 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.79■■■□□ 2.36
ATP6V0A1Q93050 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
ATP6V0A1Q93050 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 AC108673.1-201ENST00000510422 1159 ntBASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 AC021231.2-201ENST00000594613 730 ntBASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ATP6V0A1Q93050 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.76■■■□□ 2.35
ATP6V0A1Q93050 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ATP6V0A1Q93050 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ATP6V0A1Q93050 MIR6090-201ENST00000622481 60 ntBASIC29.74■■■□□ 2.35
ATP6V0A1Q93050 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
ATP6V0A1Q93050 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.72■■■□□ 2.35
ATP6V0A1Q93050 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ATP6V0A1Q93050 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.7■■■□□ 2.35
ATP6V0A1Q93050 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
ATP6V0A1Q93050 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.69■■■□□ 2.34
ATP6V0A1Q93050 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms