Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.64■■■□□ 2.65
TNPO1Q92973 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TNPO1Q92973 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TNPO1Q92973 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.62■■■□□ 2.65
TNPO1Q92973 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.61■■■□□ 2.65
TNPO1Q92973 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.6■■■□□ 2.65
TNPO1Q92973 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
TNPO1Q92973 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
TNPO1Q92973 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TNPO1Q92973 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TNPO1Q92973 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
TNPO1Q92973 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TNPO1Q92973 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
TNPO1Q92973 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
TNPO1Q92973 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.54■■■□□ 2.64
TNPO1Q92973 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TNPO1Q92973 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
TNPO1Q92973 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNPO1Q92973 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNPO1Q92973 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TNPO1Q92973 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TNPO1Q92973 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
TNPO1Q92973 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.51■■■□□ 2.63
TNPO1Q92973 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
TNPO1Q92973 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TNPO1Q92973 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.5■■■□□ 2.63
TNPO1Q92973 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
TNPO1Q92973 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
TNPO1Q92973 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.49■■■□□ 2.63
TNPO1Q92973 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.49■■■□□ 2.63
TNPO1Q92973 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNPO1Q92973 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TNPO1Q92973 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.49■■■□□ 2.63
TNPO1Q92973 SETD8P1-201ENST00000623146 1180 ntBASIC31.49■■■□□ 2.63
TNPO1Q92973 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
TNPO1Q92973 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.48■■■□□ 2.63
TNPO1Q92973 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.47■■■□□ 2.63
TNPO1Q92973 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
TNPO1Q92973 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TNPO1Q92973 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TNPO1Q92973 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TNPO1Q92973 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
TNPO1Q92973 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TNPO1Q92973 AC097358.2-201ENST00000607541 1159 ntBASIC31.44■■■□□ 2.62
TNPO1Q92973 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
TNPO1Q92973 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TNPO1Q92973 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TNPO1Q92973 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TNPO1Q92973 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TNPO1Q92973 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.42■■■□□ 2.62
TNPO1Q92973 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TNPO1Q92973 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TNPO1Q92973 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TNPO1Q92973 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.4■■■□□ 2.62
TNPO1Q92973 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
TNPO1Q92973 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.39■■■□□ 2.62
TNPO1Q92973 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TNPO1Q92973 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TNPO1Q92973 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNPO1Q92973 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.36■■■□□ 2.61
TNPO1Q92973 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.36■■■□□ 2.61
TNPO1Q92973 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
TNPO1Q92973 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNPO1Q92973 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TNPO1Q92973 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNPO1Q92973 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TNPO1Q92973 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.35■■■□□ 2.61
TNPO1Q92973 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.34■■■□□ 2.61
TNPO1Q92973 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TNPO1Q92973 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TNPO1Q92973 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TNPO1Q92973 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TNPO1Q92973 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TNPO1Q92973 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TNPO1Q92973 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TNPO1Q92973 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TNPO1Q92973 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.29■■■□□ 2.6
TNPO1Q92973 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TNPO1Q92973 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TNPO1Q92973 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TNPO1Q92973 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TNPO1Q92973 AC136428.2-201ENST00000563187 214 ntBASIC31.28■■■□□ 2.6
TNPO1Q92973 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
TNPO1Q92973 AC142086.6-201ENST00000621154 1765 ntBASIC31.28■■■□□ 2.6
TNPO1Q92973 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.27■■■□□ 2.6
TNPO1Q92973 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TNPO1Q92973 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.25■■■□□ 2.59
TNPO1Q92973 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
TNPO1Q92973 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.24■■■□□ 2.59
TNPO1Q92973 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
TNPO1Q92973 AL135925.1-201ENST00000605920 1701 ntBASIC31.23■■■□□ 2.59
TNPO1Q92973 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TNPO1Q92973 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
TNPO1Q92973 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TNPO1Q92973 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TNPO1Q92973 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TNPO1Q92973 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TNPO1Q92973 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TNPO1Q92973 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TNPO1Q92973 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms