Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
NPIPB3Q92617 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPIPB3Q92617 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPIPB3Q92617 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NPIPB3Q92617 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPB3Q92617 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NPIPB3Q92617 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPB3Q92617 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
NPIPB3Q92617 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPIPB3Q92617 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPB3Q92617 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPB3Q92617 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPB3Q92617 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPB3Q92617 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPB3Q92617 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPB3Q92617 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.91■□□□□ 0.94
NPIPB3Q92617 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.91■□□□□ 0.94
NPIPB3Q92617 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPB3Q92617 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPB3Q92617 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NPIPB3Q92617 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPB3Q92617 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPB3Q92617 AL135925.1-201ENST00000605920 1701 ntBASIC20.9■□□□□ 0.94
NPIPB3Q92617 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.89■□□□□ 0.93
NPIPB3Q92617 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.89■□□□□ 0.93
NPIPB3Q92617 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.89■□□□□ 0.93
NPIPB3Q92617 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPB3Q92617 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPB3Q92617 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPB3Q92617 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPB3Q92617 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB3Q92617 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.87■□□□□ 0.93
NPIPB3Q92617 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB3Q92617 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NPIPB3Q92617 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NPIPB3Q92617 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPB3Q92617 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB3Q92617 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB3Q92617 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB3Q92617 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB3Q92617 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.83■□□□□ 0.93
NPIPB3Q92617 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB3Q92617 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB3Q92617 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NPIPB3Q92617 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.81■□□□□ 0.92
NPIPB3Q92617 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB3Q92617 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.8■□□□□ 0.92
NPIPB3Q92617 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB3Q92617 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB3Q92617 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB3Q92617 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.79■□□□□ 0.92
NPIPB3Q92617 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.79■□□□□ 0.92
NPIPB3Q92617 WASH5P-204ENST00000632292 975 ntBASIC20.79■□□□□ 0.92
NPIPB3Q92617 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB3Q92617 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB3Q92617 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.78■□□□□ 0.92
NPIPB3Q92617 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPB3Q92617 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NPIPB3Q92617 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB3Q92617 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB3Q92617 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.76■□□□□ 0.91
NPIPB3Q92617 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPIPB3Q92617 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NPIPB3Q92617 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.75■□□□□ 0.91
NPIPB3Q92617 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB3Q92617 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB3Q92617 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPIPB3Q92617 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB3Q92617 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPIPB3Q92617 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPB3Q92617 AL133380.1-201ENST00000506013 324 ntBASIC20.71■□□□□ 0.91
NPIPB3Q92617 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.71■□□□□ 0.91
NPIPB3Q92617 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB3Q92617 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.7■□□□□ 0.9
NPIPB3Q92617 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPB3Q92617 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB3Q92617 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NPIPB3Q92617 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.69■□□□□ 0.9
NPIPB3Q92617 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB3Q92617 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB3Q92617 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPB3Q92617 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB3Q92617 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB3Q92617 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB3Q92617 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPB3Q92617 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB3Q92617 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB3Q92617 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPIPB3Q92617 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NPIPB3Q92617 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPB3Q92617 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NPIPB3Q92617 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPIPB3Q92617 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.64■□□□□ 0.9
NPIPB3Q92617 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NPIPB3Q92617 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB3Q92617 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB3Q92617 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB3Q92617 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPB3Q92617 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPB3Q92617 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms