Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga11Q91XY8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhga11Q91XY8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdhga11Q91XY8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga11Q91XY8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhga11Q91XY8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhga11Q91XY8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Pcdhga11Q91XY8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhga11Q91XY8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhga11Q91XY8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhga11Q91XY8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga11Q91XY8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhga11Q91XY8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdhga11Q91XY8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga11Q91XY8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhga11Q91XY8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhga11Q91XY8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Pcdhga11Q91XY8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdhga11Q91XY8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhga11Q91XY8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga11Q91XY8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga11Q91XY8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhga11Q91XY8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga11Q91XY8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga11Q91XY8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga11Q91XY8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga11Q91XY8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.62■■□□□ 1.37
Pcdhga11Q91XY8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga11Q91XY8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga11Q91XY8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhga11Q91XY8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhga11Q91XY8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhga11Q91XY8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga11Q91XY8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.6■■□□□ 1.37
Pcdhga11Q91XY8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga11Q91XY8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga11Q91XY8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
Pcdhga11Q91XY8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdhga11Q91XY8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhga11Q91XY8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
Pcdhga11Q91XY8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhga11Q91XY8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Pcdhga11Q91XY8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Pcdhga11Q91XY8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhga11Q91XY8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhga11Q91XY8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga11Q91XY8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga11Q91XY8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga11Q91XY8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhga11Q91XY8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhga11Q91XY8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhga11Q91XY8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga11Q91XY8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga11Q91XY8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga11Q91XY8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.52■■□□□ 1.35
Pcdhga11Q91XY8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhga11Q91XY8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhga11Q91XY8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga11Q91XY8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga11Q91XY8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga11Q91XY8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhga11Q91XY8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
Pcdhga11Q91XY8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga11Q91XY8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga11Q91XY8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhga11Q91XY8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhga11Q91XY8 Amer2-203ENSMUST00000225247 2662 ntBASIC23.48■■□□□ 1.35
Pcdhga11Q91XY8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhga11Q91XY8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhga11Q91XY8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.47■■□□□ 1.35
Pcdhga11Q91XY8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhga11Q91XY8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhga11Q91XY8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhga11Q91XY8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.45■■□□□ 1.34
Pcdhga11Q91XY8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhga11Q91XY8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhga11Q91XY8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhga11Q91XY8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdhga11Q91XY8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga11Q91XY8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga11Q91XY8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga11Q91XY8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga11Q91XY8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.41■■□□□ 1.34
Pcdhga11Q91XY8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.41■■□□□ 1.34
Pcdhga11Q91XY8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga11Q91XY8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.4■■□□□ 1.34
Pcdhga11Q91XY8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhga11Q91XY8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhga11Q91XY8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.38■■□□□ 1.33
Pcdhga11Q91XY8 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.38■■□□□ 1.33
Pcdhga11Q91XY8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhga11Q91XY8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Pcdhga11Q91XY8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.36■■□□□ 1.33
Pcdhga11Q91XY8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Pcdhga11Q91XY8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga11Q91XY8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga11Q91XY8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Pcdhga11Q91XY8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga11Q91XY8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhga11Q91XY8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms