Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
BCAS4Q8TDM0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BCAS4Q8TDM0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
BCAS4Q8TDM0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.03■■□□□ 1.92
BCAS4Q8TDM0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
BCAS4Q8TDM0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
BCAS4Q8TDM0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.01■■□□□ 1.91
BCAS4Q8TDM0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.01■■□□□ 1.91
BCAS4Q8TDM0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
BCAS4Q8TDM0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
BCAS4Q8TDM0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
BCAS4Q8TDM0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BCAS4Q8TDM0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BCAS4Q8TDM0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BCAS4Q8TDM0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BCAS4Q8TDM0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BCAS4Q8TDM0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
BCAS4Q8TDM0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
BCAS4Q8TDM0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
BCAS4Q8TDM0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
BCAS4Q8TDM0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
BCAS4Q8TDM0 AL121749.1-202ENST00000609313 2153 ntBASIC26.97■■□□□ 1.91
BCAS4Q8TDM0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BCAS4Q8TDM0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BCAS4Q8TDM0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
BCAS4Q8TDM0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
BCAS4Q8TDM0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
BCAS4Q8TDM0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
BCAS4Q8TDM0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
BCAS4Q8TDM0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.94■■□□□ 1.9
BCAS4Q8TDM0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BCAS4Q8TDM0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BCAS4Q8TDM0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
BCAS4Q8TDM0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BCAS4Q8TDM0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BCAS4Q8TDM0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BCAS4Q8TDM0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BCAS4Q8TDM0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.89■■□□□ 1.9
BCAS4Q8TDM0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
BCAS4Q8TDM0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
BCAS4Q8TDM0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
BCAS4Q8TDM0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.87■■□□□ 1.89
BCAS4Q8TDM0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
BCAS4Q8TDM0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
BCAS4Q8TDM0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
BCAS4Q8TDM0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
BCAS4Q8TDM0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
BCAS4Q8TDM0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.81■■□□□ 1.88
BCAS4Q8TDM0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
BCAS4Q8TDM0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
BCAS4Q8TDM0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BCAS4Q8TDM0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
BCAS4Q8TDM0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
BCAS4Q8TDM0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
BCAS4Q8TDM0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.78■■□□□ 1.88
BCAS4Q8TDM0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
BCAS4Q8TDM0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
BCAS4Q8TDM0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.76■■□□□ 1.88
BCAS4Q8TDM0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.87
BCAS4Q8TDM0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
BCAS4Q8TDM0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BCAS4Q8TDM0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
BCAS4Q8TDM0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
BCAS4Q8TDM0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BCAS4Q8TDM0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BCAS4Q8TDM0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.74■■□□□ 1.87
BCAS4Q8TDM0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.74■■□□□ 1.87
BCAS4Q8TDM0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
BCAS4Q8TDM0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BCAS4Q8TDM0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.73■■□□□ 1.87
BCAS4Q8TDM0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
BCAS4Q8TDM0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.72■■□□□ 1.87
BCAS4Q8TDM0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.87
BCAS4Q8TDM0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.7■■□□□ 1.87
BCAS4Q8TDM0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
BCAS4Q8TDM0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
BCAS4Q8TDM0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.69■■□□□ 1.86
BCAS4Q8TDM0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
BCAS4Q8TDM0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
BCAS4Q8TDM0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BCAS4Q8TDM0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BCAS4Q8TDM0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BCAS4Q8TDM0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
BCAS4Q8TDM0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BCAS4Q8TDM0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
BCAS4Q8TDM0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BCAS4Q8TDM0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.65■■□□□ 1.86
BCAS4Q8TDM0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
BCAS4Q8TDM0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
BCAS4Q8TDM0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BCAS4Q8TDM0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.64■■□□□ 1.86
BCAS4Q8TDM0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
BCAS4Q8TDM0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
BCAS4Q8TDM0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
BCAS4Q8TDM0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BCAS4Q8TDM0 DRD5P2-201ENST00000421395 2012 ntBASIC26.62■■□□□ 1.85
BCAS4Q8TDM0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BCAS4Q8TDM0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BCAS4Q8TDM0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BCAS4Q8TDM0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms