Protein–RNA interactions for Protein: Q8NEY4

ATP6V1C2, V-type proton ATPase subunit C 2, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2Q8NEY4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
ATP6V1C2Q8NEY4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1C2Q8NEY4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V1C2Q8NEY4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V1C2Q8NEY4 AL391121.1-201ENST00000607967 1349 ntBASIC24.41■■□□□ 1.5
ATP6V1C2Q8NEY4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.41■■□□□ 1.5
ATP6V1C2Q8NEY4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.41■■□□□ 1.5
ATP6V1C2Q8NEY4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.4■■□□□ 1.5
ATP6V1C2Q8NEY4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V1C2Q8NEY4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1C2Q8NEY4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.5
ATP6V1C2Q8NEY4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V1C2Q8NEY4 AL161658.1-201ENST00000623641 1967 ntBASIC24.38■■□□□ 1.49
ATP6V1C2Q8NEY4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.38■■□□□ 1.49
ATP6V1C2Q8NEY4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V1C2Q8NEY4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V1C2Q8NEY4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP6V1C2Q8NEY4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6V1C2Q8NEY4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6V1C2Q8NEY4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6V1C2Q8NEY4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.36■■□□□ 1.49
ATP6V1C2Q8NEY4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6V1C2Q8NEY4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP6V1C2Q8NEY4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.35■■□□□ 1.49
ATP6V1C2Q8NEY4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP6V1C2Q8NEY4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ATP6V1C2Q8NEY4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ATP6V1C2Q8NEY4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6V1C2Q8NEY4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6V1C2Q8NEY4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.34■■□□□ 1.49
ATP6V1C2Q8NEY4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP6V1C2Q8NEY4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP6V1C2Q8NEY4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP6V1C2Q8NEY4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6V1C2Q8NEY4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
ATP6V1C2Q8NEY4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6V1C2Q8NEY4 SUZ12P1-203ENST00000578195 985 ntBASIC24.3■■□□□ 1.48
ATP6V1C2Q8NEY4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1C2Q8NEY4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ATP6V1C2Q8NEY4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6V1C2Q8NEY4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
ATP6V1C2Q8NEY4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1C2Q8NEY4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6V1C2Q8NEY4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6V1C2Q8NEY4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.27■■□□□ 1.48
ATP6V1C2Q8NEY4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6V1C2Q8NEY4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
ATP6V1C2Q8NEY4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V1C2Q8NEY4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V1C2Q8NEY4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6V1C2Q8NEY4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP6V1C2Q8NEY4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.23■■□□□ 1.47
ATP6V1C2Q8NEY4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.23■■□□□ 1.47
ATP6V1C2Q8NEY4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP6V1C2Q8NEY4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
ATP6V1C2Q8NEY4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V1C2Q8NEY4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V1C2Q8NEY4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.22■■□□□ 1.47
ATP6V1C2Q8NEY4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP6V1C2Q8NEY4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V1C2Q8NEY4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.21■■□□□ 1.47
ATP6V1C2Q8NEY4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V1C2Q8NEY4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP6V1C2Q8NEY4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.2■■□□□ 1.47
ATP6V1C2Q8NEY4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
ATP6V1C2Q8NEY4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
ATP6V1C2Q8NEY4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.2■■□□□ 1.46
ATP6V1C2Q8NEY4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP6V1C2Q8NEY4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP6V1C2Q8NEY4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP6V1C2Q8NEY4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP6V1C2Q8NEY4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
ATP6V1C2Q8NEY4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
ATP6V1C2Q8NEY4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
ATP6V1C2Q8NEY4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATP6V1C2Q8NEY4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ATP6V1C2Q8NEY4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATP6V1C2Q8NEY4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1C2Q8NEY4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1C2Q8NEY4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1C2Q8NEY4 AC139426.1-201ENST00000568218 2529 ntBASIC24.15■■□□□ 1.46
ATP6V1C2Q8NEY4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.14■■□□□ 1.45
ATP6V1C2Q8NEY4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V1C2Q8NEY4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
ATP6V1C2Q8NEY4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1C2Q8NEY4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1C2Q8NEY4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1C2Q8NEY4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.1■■□□□ 1.45
ATP6V1C2Q8NEY4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V1C2Q8NEY4 MIR762-201ENST00000390236 83 ntBASIC24.1■■□□□ 1.45
ATP6V1C2Q8NEY4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ATP6V1C2Q8NEY4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP6V1C2Q8NEY4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms