Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRTM2Q8N967 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LRTM2Q8N967 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.91■■□□□ 1.1
LRTM2Q8N967 AL135925.1-201ENST00000605920 1701 ntBASIC21.9■■□□□ 1.1
LRTM2Q8N967 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LRTM2Q8N967 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.9■■□□□ 1.1
LRTM2Q8N967 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
LRTM2Q8N967 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRTM2Q8N967 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM2Q8N967 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM2Q8N967 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM2Q8N967 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM2Q8N967 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRTM2Q8N967 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM2Q8N967 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM2Q8N967 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM2Q8N967 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRTM2Q8N967 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRTM2Q8N967 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRTM2Q8N967 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRTM2Q8N967 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM2Q8N967 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM2Q8N967 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRTM2Q8N967 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
LRTM2Q8N967 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LRTM2Q8N967 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
LRTM2Q8N967 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
LRTM2Q8N967 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRTM2Q8N967 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM2Q8N967 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRTM2Q8N967 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.79■■□□□ 1.08
LRTM2Q8N967 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRTM2Q8N967 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRTM2Q8N967 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM2Q8N967 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM2Q8N967 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM2Q8N967 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM2Q8N967 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRTM2Q8N967 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LRTM2Q8N967 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LRTM2Q8N967 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
LRTM2Q8N967 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.76■■□□□ 1.07
LRTM2Q8N967 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.76■■□□□ 1.07
LRTM2Q8N967 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRTM2Q8N967 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM2Q8N967 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM2Q8N967 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.75■■□□□ 1.07
LRTM2Q8N967 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM2Q8N967 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRTM2Q8N967 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
LRTM2Q8N967 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM2Q8N967 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM2Q8N967 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRTM2Q8N967 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM2Q8N967 AC006077.2-201ENST00000623591 457 ntBASIC21.73■■□□□ 1.07
LRTM2Q8N967 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM2Q8N967 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRTM2Q8N967 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.72■■□□□ 1.07
LRTM2Q8N967 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRTM2Q8N967 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRTM2Q8N967 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
LRTM2Q8N967 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRTM2Q8N967 AL139393.2-201ENST00000608721 2025 ntBASIC21.68■■□□□ 1.06
LRTM2Q8N967 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRTM2Q8N967 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM2Q8N967 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM2Q8N967 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRTM2Q8N967 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRTM2Q8N967 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRTM2Q8N967 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LRTM2Q8N967 DRD5P2-201ENST00000421395 2012 ntBASIC21.65■■□□□ 1.06
LRTM2Q8N967 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM2Q8N967 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.65■■□□□ 1.06
LRTM2Q8N967 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRTM2Q8N967 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRTM2Q8N967 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM2Q8N967 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRTM2Q8N967 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM2Q8N967 AL121749.1-202ENST00000609313 2153 ntBASIC21.61■■□□□ 1.05
LRTM2Q8N967 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM2Q8N967 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM2Q8N967 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRTM2Q8N967 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LRTM2Q8N967 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM2Q8N967 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM2Q8N967 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM2Q8N967 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRTM2Q8N967 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.59■■□□□ 1.05
LRTM2Q8N967 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRTM2Q8N967 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.58■■□□□ 1.05
LRTM2Q8N967 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRTM2Q8N967 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM2Q8N967 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRTM2Q8N967 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRTM2Q8N967 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM2Q8N967 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.55■■□□□ 1.04
LRTM2Q8N967 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRTM2Q8N967 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.54■■□□□ 1.04
LRTM2Q8N967 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRTM2Q8N967 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms