Protein–RNA interactions for Protein: Q8N8R3

SLC25A29, Mitochondrial basic amino acids transporter, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A29Q8N8R3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC25A29Q8N8R3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC25A29Q8N8R3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
SLC25A29Q8N8R3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC25A29Q8N8R3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLC25A29Q8N8R3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC25A29Q8N8R3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC25A29Q8N8R3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC25A29Q8N8R3 AL133380.1-201ENST00000506013 324 ntBASIC18.99■□□□□ 0.63
SLC25A29Q8N8R3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC25A29Q8N8R3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC25A29Q8N8R3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SLC25A29Q8N8R3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC25A29Q8N8R3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC25A29Q8N8R3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC25A29Q8N8R3 RARRES2P7-201ENST00000567349 469 ntBASIC18.95■□□□□ 0.62
SLC25A29Q8N8R3 WASH5P-204ENST00000632292 975 ntBASIC18.95■□□□□ 0.62
SLC25A29Q8N8R3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SLC25A29Q8N8R3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC25A29Q8N8R3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A29Q8N8R3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A29Q8N8R3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.93■□□□□ 0.62
SLC25A29Q8N8R3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC25A29Q8N8R3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC25A29Q8N8R3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC25A29Q8N8R3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC25A29Q8N8R3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SLC25A29Q8N8R3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC25A29Q8N8R3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC25A29Q8N8R3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC25A29Q8N8R3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC25A29Q8N8R3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC25A29Q8N8R3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC25A29Q8N8R3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC25A29Q8N8R3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC25A29Q8N8R3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC25A29Q8N8R3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC25A29Q8N8R3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 SETD8P1-201ENST00000623146 1180 ntBASIC18.87■□□□□ 0.61
SLC25A29Q8N8R3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC25A29Q8N8R3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC25A29Q8N8R3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SLC25A29Q8N8R3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC25A29Q8N8R3 ST7-AS1-201ENST00000456775 1889 ntBASIC18.84■□□□□ 0.61
SLC25A29Q8N8R3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC25A29Q8N8R3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC25A29Q8N8R3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC25A29Q8N8R3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC25A29Q8N8R3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A29Q8N8R3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC25A29Q8N8R3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A29Q8N8R3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A29Q8N8R3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC25A29Q8N8R3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A29Q8N8R3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC25A29Q8N8R3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC25A29Q8N8R3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC25A29Q8N8R3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC25A29Q8N8R3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC25A29Q8N8R3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC25A29Q8N8R3 AL135925.1-201ENST00000605920 1701 ntBASIC18.8■□□□□ 0.6
SLC25A29Q8N8R3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A29Q8N8R3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A29Q8N8R3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A29Q8N8R3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC25A29Q8N8R3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC25A29Q8N8R3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A29Q8N8R3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A29Q8N8R3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC25A29Q8N8R3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A29Q8N8R3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC25A29Q8N8R3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC25A29Q8N8R3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A29Q8N8R3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A29Q8N8R3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A29Q8N8R3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A29Q8N8R3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC25A29Q8N8R3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A29Q8N8R3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC25A29Q8N8R3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A29Q8N8R3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC25A29Q8N8R3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A29Q8N8R3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC25A29Q8N8R3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC25A29Q8N8R3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC25A29Q8N8R3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC25A29Q8N8R3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC25A29Q8N8R3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC25A29Q8N8R3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC25A29Q8N8R3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC25A29Q8N8R3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC25A29Q8N8R3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC25A29Q8N8R3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC25A29Q8N8R3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms