Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COMMD1Q8N668 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.83■■□□□ 1.09
COMMD1Q8N668 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
COMMD1Q8N668 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.83■■□□□ 1.08
COMMD1Q8N668 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COMMD1Q8N668 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COMMD1Q8N668 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
COMMD1Q8N668 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.8■■□□□ 1.08
COMMD1Q8N668 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COMMD1Q8N668 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD1Q8N668 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COMMD1Q8N668 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
COMMD1Q8N668 AC097358.2-201ENST00000607541 1159 ntBASIC21.77■■□□□ 1.08
COMMD1Q8N668 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
COMMD1Q8N668 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.76■■□□□ 1.07
COMMD1Q8N668 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD1Q8N668 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COMMD1Q8N668 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COMMD1Q8N668 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.75■■□□□ 1.07
COMMD1Q8N668 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.75■■□□□ 1.07
COMMD1Q8N668 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COMMD1Q8N668 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COMMD1Q8N668 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COMMD1Q8N668 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COMMD1Q8N668 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COMMD1Q8N668 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD1Q8N668 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD1Q8N668 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
COMMD1Q8N668 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD1Q8N668 AC120057.4-201ENST00000624722 1615 ntBASIC21.72■■□□□ 1.07
COMMD1Q8N668 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COMMD1Q8N668 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COMMD1Q8N668 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COMMD1Q8N668 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.71■■□□□ 1.07
COMMD1Q8N668 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COMMD1Q8N668 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD1Q8N668 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD1Q8N668 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COMMD1Q8N668 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COMMD1Q8N668 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.7■■□□□ 1.06
COMMD1Q8N668 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COMMD1Q8N668 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD1Q8N668 AC142086.6-201ENST00000621154 1765 ntBASIC21.68■■□□□ 1.06
COMMD1Q8N668 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD1Q8N668 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD1Q8N668 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD1Q8N668 AC136428.2-201ENST00000563187 214 ntBASIC21.67■■□□□ 1.06
COMMD1Q8N668 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD1Q8N668 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.66■■□□□ 1.06
COMMD1Q8N668 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.66■■□□□ 1.06
COMMD1Q8N668 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD1Q8N668 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.65■■□□□ 1.06
COMMD1Q8N668 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD1Q8N668 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.64■■□□□ 1.06
COMMD1Q8N668 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.64■■□□□ 1.05
COMMD1Q8N668 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD1Q8N668 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.64■■□□□ 1.05
COMMD1Q8N668 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.63■■□□□ 1.05
COMMD1Q8N668 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD1Q8N668 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.63■■□□□ 1.05
COMMD1Q8N668 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD1Q8N668 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD1Q8N668 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD1Q8N668 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.63■■□□□ 1.05
COMMD1Q8N668 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.62■■□□□ 1.05
COMMD1Q8N668 AL133380.1-201ENST00000506013 324 ntBASIC21.62■■□□□ 1.05
COMMD1Q8N668 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.62■■□□□ 1.05
COMMD1Q8N668 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COMMD1Q8N668 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD1Q8N668 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD1Q8N668 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD1Q8N668 AC135731.1-201ENST00000569415 2548 ntBASIC21.61■■□□□ 1.05
COMMD1Q8N668 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD1Q8N668 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD1Q8N668 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD1Q8N668 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COMMD1Q8N668 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD1Q8N668 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.6■■□□□ 1.05
COMMD1Q8N668 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
COMMD1Q8N668 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD1Q8N668 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.59■■□□□ 1.05
COMMD1Q8N668 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD1Q8N668 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.58■■□□□ 1.05
COMMD1Q8N668 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
COMMD1Q8N668 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD1Q8N668 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD1Q8N668 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD1Q8N668 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD1Q8N668 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD1Q8N668 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD1Q8N668 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD1Q8N668 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD1Q8N668 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.55■■□□□ 1.04
COMMD1Q8N668 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD1Q8N668 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms