Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ARHGEF39Q8N4T4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ARHGEF39Q8N4T4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ARHGEF39Q8N4T4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARHGEF39Q8N4T4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ARHGEF39Q8N4T4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 AC087741.3-201ENST00000624270 1347 ntBASIC25.37■■□□□ 1.65
ARHGEF39Q8N4T4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ARHGEF39Q8N4T4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.35■■□□□ 1.65
ARHGEF39Q8N4T4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ARHGEF39Q8N4T4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.34■■□□□ 1.65
ARHGEF39Q8N4T4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
ARHGEF39Q8N4T4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ARHGEF39Q8N4T4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ARHGEF39Q8N4T4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
ARHGEF39Q8N4T4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ARHGEF39Q8N4T4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
ARHGEF39Q8N4T4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.26■■□□□ 1.63
ARHGEF39Q8N4T4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.25■■□□□ 1.63
ARHGEF39Q8N4T4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.24■■□□□ 1.63
ARHGEF39Q8N4T4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.24■■□□□ 1.63
ARHGEF39Q8N4T4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF39Q8N4T4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF39Q8N4T4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF39Q8N4T4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ARHGEF39Q8N4T4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
ARHGEF39Q8N4T4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.19■■□□□ 1.62
ARHGEF39Q8N4T4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.19■■□□□ 1.62
ARHGEF39Q8N4T4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 AC044849.2-201ENST00000606596 710 ntBASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
ARHGEF39Q8N4T4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.17■■□□□ 1.62
ARHGEF39Q8N4T4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ARHGEF39Q8N4T4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ARHGEF39Q8N4T4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF39Q8N4T4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ARHGEF39Q8N4T4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF39Q8N4T4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ARHGEF39Q8N4T4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ARHGEF39Q8N4T4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.13■■□□□ 1.61
ARHGEF39Q8N4T4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
ARHGEF39Q8N4T4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF39Q8N4T4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF39Q8N4T4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 MIR6090-201ENST00000622481 60 ntBASIC25.09■■□□□ 1.61
ARHGEF39Q8N4T4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
ARHGEF39Q8N4T4 AL135925.1-201ENST00000605920 1701 ntBASIC25.06■■□□□ 1.6
ARHGEF39Q8N4T4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF39Q8N4T4 AC010864.1-201ENST00000609407 1511 ntBASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms