Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHPFQ8IZ52 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.29■■□□□ 1.96
CHPFQ8IZ52 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
CHPFQ8IZ52 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHPFQ8IZ52 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHPFQ8IZ52 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CHPFQ8IZ52 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.28■■□□□ 1.96
CHPFQ8IZ52 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CHPFQ8IZ52 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CHPFQ8IZ52 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CHPFQ8IZ52 HLA-V-202ENST00000446817 847 ntBASIC27.26■■□□□ 1.95
CHPFQ8IZ52 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.25■■□□□ 1.95
CHPFQ8IZ52 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.24■■□□□ 1.95
CHPFQ8IZ52 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CHPFQ8IZ52 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CHPFQ8IZ52 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.22■■□□□ 1.95
CHPFQ8IZ52 AC108673.1-201ENST00000510422 1159 ntBASIC27.22■■□□□ 1.95
CHPFQ8IZ52 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHPFQ8IZ52 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHPFQ8IZ52 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CHPFQ8IZ52 AC021231.2-201ENST00000594613 730 ntBASIC27.2■■□□□ 1.94
CHPFQ8IZ52 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHPFQ8IZ52 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CHPFQ8IZ52 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHPFQ8IZ52 AC120057.4-201ENST00000624722 1615 ntBASIC27.18■■□□□ 1.94
CHPFQ8IZ52 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHPFQ8IZ52 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.17■■□□□ 1.94
CHPFQ8IZ52 MIR6090-201ENST00000622481 60 ntBASIC27.17■■□□□ 1.94
CHPFQ8IZ52 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CHPFQ8IZ52 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHPFQ8IZ52 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHPFQ8IZ52 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHPFQ8IZ52 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHPFQ8IZ52 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHPFQ8IZ52 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CHPFQ8IZ52 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.15■■□□□ 1.94
CHPFQ8IZ52 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.14■■□□□ 1.94
CHPFQ8IZ52 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CHPFQ8IZ52 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.13■■□□□ 1.93
CHPFQ8IZ52 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.13■■□□□ 1.93
CHPFQ8IZ52 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHPFQ8IZ52 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
CHPFQ8IZ52 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHPFQ8IZ52 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHPFQ8IZ52 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.09■■□□□ 1.93
CHPFQ8IZ52 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.09■■□□□ 1.93
CHPFQ8IZ52 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.09■■□□□ 1.93
CHPFQ8IZ52 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.08■■□□□ 1.93
CHPFQ8IZ52 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CHPFQ8IZ52 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
CHPFQ8IZ52 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CHPFQ8IZ52 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
CHPFQ8IZ52 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CHPFQ8IZ52 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CHPFQ8IZ52 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
CHPFQ8IZ52 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CHPFQ8IZ52 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHPFQ8IZ52 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CHPFQ8IZ52 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27■■□□□ 1.91
CHPFQ8IZ52 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27■■□□□ 1.91
CHPFQ8IZ52 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.99■■□□□ 1.91
CHPFQ8IZ52 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
CHPFQ8IZ52 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
CHPFQ8IZ52 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CHPFQ8IZ52 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CHPFQ8IZ52 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHPFQ8IZ52 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CHPFQ8IZ52 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHPFQ8IZ52 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CHPFQ8IZ52 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.92■■□□□ 1.9
CHPFQ8IZ52 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CHPFQ8IZ52 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHPFQ8IZ52 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CHPFQ8IZ52 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
CHPFQ8IZ52 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHPFQ8IZ52 LINC01971-201ENST00000617888 1048 ntBASIC26.91■■□□□ 1.9
CHPFQ8IZ52 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.91■■□□□ 1.9
CHPFQ8IZ52 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CHPFQ8IZ52 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CHPFQ8IZ52 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.89■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms