Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC36Q8IYA8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC36Q8IYA8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC36Q8IYA8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC36Q8IYA8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC36Q8IYA8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CCDC36Q8IYA8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC36Q8IYA8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC36Q8IYA8 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.47■■□□□ 1.35
CCDC36Q8IYA8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC36Q8IYA8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
CCDC36Q8IYA8 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.46■■□□□ 1.35
CCDC36Q8IYA8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
CCDC36Q8IYA8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CCDC36Q8IYA8 AP006261.1-201ENST00000584783 668 ntBASIC23.44■■□□□ 1.34
CCDC36Q8IYA8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC36Q8IYA8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC36Q8IYA8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC36Q8IYA8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC36Q8IYA8 MIR762-201ENST00000390236 83 ntBASIC23.42■■□□□ 1.34
CCDC36Q8IYA8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CCDC36Q8IYA8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CCDC36Q8IYA8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC36Q8IYA8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC36Q8IYA8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC36Q8IYA8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.41■■□□□ 1.34
CCDC36Q8IYA8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC36Q8IYA8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC36Q8IYA8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC36Q8IYA8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC36Q8IYA8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC36Q8IYA8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC36Q8IYA8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCDC36Q8IYA8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.37■■□□□ 1.33
CCDC36Q8IYA8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
CCDC36Q8IYA8 MIR3665-201ENST00000578708 105 ntBASIC23.36■■□□□ 1.33
CCDC36Q8IYA8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCDC36Q8IYA8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC36Q8IYA8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.36■■□□□ 1.33
CCDC36Q8IYA8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CCDC36Q8IYA8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC36Q8IYA8 AC005559.1-201ENST00000589661 871 ntBASIC23.34■■□□□ 1.33
CCDC36Q8IYA8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC36Q8IYA8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC36Q8IYA8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCDC36Q8IYA8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC36Q8IYA8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC36Q8IYA8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC36Q8IYA8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC36Q8IYA8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC36Q8IYA8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC36Q8IYA8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC36Q8IYA8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.31■■□□□ 1.32
CCDC36Q8IYA8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCDC36Q8IYA8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCDC36Q8IYA8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCDC36Q8IYA8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.29■■□□□ 1.32
CCDC36Q8IYA8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.29■■□□□ 1.32
CCDC36Q8IYA8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC36Q8IYA8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC36Q8IYA8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC36Q8IYA8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CCDC36Q8IYA8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.26■■□□□ 1.31
CCDC36Q8IYA8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.26■■□□□ 1.31
CCDC36Q8IYA8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC36Q8IYA8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC36Q8IYA8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC36Q8IYA8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC36Q8IYA8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.24■■□□□ 1.31
CCDC36Q8IYA8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
CCDC36Q8IYA8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CCDC36Q8IYA8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC36Q8IYA8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC36Q8IYA8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC36Q8IYA8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC36Q8IYA8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC36Q8IYA8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC36Q8IYA8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC36Q8IYA8 AL162393.1-201ENST00000437852 946 ntBASIC23.21■■□□□ 1.31
CCDC36Q8IYA8 DUX4L28-201ENST00000623687 678 ntBASIC23.21■■□□□ 1.31
CCDC36Q8IYA8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC36Q8IYA8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC36Q8IYA8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC36Q8IYA8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC36Q8IYA8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC36Q8IYA8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC36Q8IYA8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC36Q8IYA8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC36Q8IYA8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms