Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Vps50Q8CI71 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Vps50Q8CI71 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vps50Q8CI71 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Vps50Q8CI71 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps50Q8CI71 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps50Q8CI71 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vps50Q8CI71 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.86■■□□□ 1.41
Vps50Q8CI71 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps50Q8CI71 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vps50Q8CI71 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Vps50Q8CI71 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vps50Q8CI71 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps50Q8CI71 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps50Q8CI71 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps50Q8CI71 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vps50Q8CI71 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps50Q8CI71 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vps50Q8CI71 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps50Q8CI71 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps50Q8CI71 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Vps50Q8CI71 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.79■■□□□ 1.4
Vps50Q8CI71 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Vps50Q8CI71 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps50Q8CI71 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps50Q8CI71 Gm9397-201ENSMUST00000200125 605 ntBASIC23.78■■□□□ 1.4
Vps50Q8CI71 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Vps50Q8CI71 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Vps50Q8CI71 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps50Q8CI71 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vps50Q8CI71 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vps50Q8CI71 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Vps50Q8CI71 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.75■■□□□ 1.39
Vps50Q8CI71 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.75■■□□□ 1.39
Vps50Q8CI71 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vps50Q8CI71 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Vps50Q8CI71 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.74■■□□□ 1.39
Vps50Q8CI71 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.72■■□□□ 1.39
Vps50Q8CI71 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps50Q8CI71 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps50Q8CI71 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps50Q8CI71 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps50Q8CI71 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.7■■□□□ 1.38
Vps50Q8CI71 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vps50Q8CI71 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.7■■□□□ 1.38
Vps50Q8CI71 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Vps50Q8CI71 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.69■■□□□ 1.38
Vps50Q8CI71 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Vps50Q8CI71 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Vps50Q8CI71 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vps50Q8CI71 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Vps50Q8CI71 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vps50Q8CI71 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps50Q8CI71 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vps50Q8CI71 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
Vps50Q8CI71 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps50Q8CI71 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps50Q8CI71 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.66■■□□□ 1.38
Vps50Q8CI71 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vps50Q8CI71 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vps50Q8CI71 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.64■■□□□ 1.38
Vps50Q8CI71 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Vps50Q8CI71 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Vps50Q8CI71 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.64■■□□□ 1.37
Vps50Q8CI71 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps50Q8CI71 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps50Q8CI71 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vps50Q8CI71 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.63■■□□□ 1.37
Vps50Q8CI71 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.62■■□□□ 1.37
Vps50Q8CI71 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Vps50Q8CI71 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vps50Q8CI71 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Vps50Q8CI71 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Vps50Q8CI71 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vps50Q8CI71 Gm24970-201ENSMUST00000175582 82 ntBASIC23.61■■□□□ 1.37
Vps50Q8CI71 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.61■■□□□ 1.37
Vps50Q8CI71 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps50Q8CI71 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Vps50Q8CI71 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps50Q8CI71 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Vps50Q8CI71 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.59■■□□□ 1.37
Vps50Q8CI71 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.58■■□□□ 1.37
Vps50Q8CI71 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Vps50Q8CI71 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Vps50Q8CI71 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.57■■□□□ 1.36
Vps50Q8CI71 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vps50Q8CI71 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vps50Q8CI71 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vps50Q8CI71 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Vps50Q8CI71 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
Vps50Q8CI71 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Vps50Q8CI71 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Vps50Q8CI71 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Vps50Q8CI71 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vps50Q8CI71 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Vps50Q8CI71 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vps50Q8CI71 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps50Q8CI71 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Vps50Q8CI71 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.53■■□□□ 1.36
Vps50Q8CI71 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms