Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Ppp1r3eQ8BRJ4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ppp1r3eQ8BRJ4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ppp1r3eQ8BRJ4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp1r3eQ8BRJ4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ppp1r3eQ8BRJ4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ppp1r3eQ8BRJ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ppp1r3eQ8BRJ4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.32■■□□□ 1.32
Ppp1r3eQ8BRJ4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Ppp1r3eQ8BRJ4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ppp1r3eQ8BRJ4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ppp1r3eQ8BRJ4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp1r3eQ8BRJ4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ppp1r3eQ8BRJ4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
Ppp1r3eQ8BRJ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.28■■□□□ 1.32
Ppp1r3eQ8BRJ4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ppp1r3eQ8BRJ4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.27■■□□□ 1.32
Ppp1r3eQ8BRJ4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp1r3eQ8BRJ4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp1r3eQ8BRJ4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp1r3eQ8BRJ4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp1r3eQ8BRJ4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ppp1r3eQ8BRJ4 Gm24804-201ENSMUST00000174982 85 ntBASIC23.25■■□□□ 1.31
Ppp1r3eQ8BRJ4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ppp1r3eQ8BRJ4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.24■■□□□ 1.31
Ppp1r3eQ8BRJ4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppp1r3eQ8BRJ4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ppp1r3eQ8BRJ4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ppp1r3eQ8BRJ4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ppp1r3eQ8BRJ4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp1r3eQ8BRJ4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ppp1r3eQ8BRJ4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.21■■□□□ 1.31
Ppp1r3eQ8BRJ4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ppp1r3eQ8BRJ4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ppp1r3eQ8BRJ4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.2■■□□□ 1.3
Ppp1r3eQ8BRJ4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ppp1r3eQ8BRJ4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ppp1r3eQ8BRJ4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ppp1r3eQ8BRJ4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp1r3eQ8BRJ4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ppp1r3eQ8BRJ4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ppp1r3eQ8BRJ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Ppp1r3eQ8BRJ4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ppp1r3eQ8BRJ4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ppp1r3eQ8BRJ4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ppp1r3eQ8BRJ4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ppp1r3eQ8BRJ4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ppp1r3eQ8BRJ4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ppp1r3eQ8BRJ4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ppp1r3eQ8BRJ4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ppp1r3eQ8BRJ4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ppp1r3eQ8BRJ4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
Ppp1r3eQ8BRJ4 Peli2-204ENSMUST00000226513 1320 ntBASIC23.08■■□□□ 1.28
Ppp1r3eQ8BRJ4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ppp1r3eQ8BRJ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ppp1r3eQ8BRJ4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ppp1r3eQ8BRJ4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3eQ8BRJ4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3eQ8BRJ4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ppp1r3eQ8BRJ4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ppp1r3eQ8BRJ4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.03■■□□□ 1.28
Ppp1r3eQ8BRJ4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ppp1r3eQ8BRJ4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ppp1r3eQ8BRJ4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3eQ8BRJ4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ppp1r3eQ8BRJ4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ppp1r3eQ8BRJ4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ppp1r3eQ8BRJ4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ppp1r3eQ8BRJ4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Ppp1r3eQ8BRJ4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.99■■□□□ 1.27
Ppp1r3eQ8BRJ4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ppp1r3eQ8BRJ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ppp1r3eQ8BRJ4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ppp1r3eQ8BRJ4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ppp1r3eQ8BRJ4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Ppp1r3eQ8BRJ4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ppp1r3eQ8BRJ4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Ppp1r3eQ8BRJ4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ppp1r3eQ8BRJ4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ppp1r3eQ8BRJ4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
Ppp1r3eQ8BRJ4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ppp1r3eQ8BRJ4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ppp1r3eQ8BRJ4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ppp1r3eQ8BRJ4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ppp1r3eQ8BRJ4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ppp1r3eQ8BRJ4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Ppp1r3eQ8BRJ4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ppp1r3eQ8BRJ4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ppp1r3eQ8BRJ4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ppp1r3eQ8BRJ4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ppp1r3eQ8BRJ4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ppp1r3eQ8BRJ4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
Ppp1r3eQ8BRJ4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.9■■□□□ 1.26
Ppp1r3eQ8BRJ4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ppp1r3eQ8BRJ4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms