Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdh20Q8BIZ0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdh20Q8BIZ0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh20Q8BIZ0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh20Q8BIZ0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh20Q8BIZ0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh20Q8BIZ0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdh20Q8BIZ0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh20Q8BIZ0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh20Q8BIZ0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdh20Q8BIZ0 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.83■■□□□ 1.41
Pcdh20Q8BIZ0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh20Q8BIZ0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh20Q8BIZ0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh20Q8BIZ0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh20Q8BIZ0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.81■■□□□ 1.4
Pcdh20Q8BIZ0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh20Q8BIZ0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
Pcdh20Q8BIZ0 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.8■■□□□ 1.4
Pcdh20Q8BIZ0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh20Q8BIZ0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdh20Q8BIZ0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.77■■□□□ 1.4
Pcdh20Q8BIZ0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pcdh20Q8BIZ0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdh20Q8BIZ0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh20Q8BIZ0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh20Q8BIZ0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh20Q8BIZ0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh20Q8BIZ0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh20Q8BIZ0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh20Q8BIZ0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh20Q8BIZ0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Pcdh20Q8BIZ0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdh20Q8BIZ0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh20Q8BIZ0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.7■■□□□ 1.39
Pcdh20Q8BIZ0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdh20Q8BIZ0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdh20Q8BIZ0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdh20Q8BIZ0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.7■■□□□ 1.38
Pcdh20Q8BIZ0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh20Q8BIZ0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh20Q8BIZ0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdh20Q8BIZ0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh20Q8BIZ0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh20Q8BIZ0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdh20Q8BIZ0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh20Q8BIZ0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh20Q8BIZ0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh20Q8BIZ0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh20Q8BIZ0 Gm45855-201ENSMUST00000212546 880 ntBASIC23.66■■□□□ 1.38
Pcdh20Q8BIZ0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh20Q8BIZ0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh20Q8BIZ0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh20Q8BIZ0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh20Q8BIZ0 Gm9397-201ENSMUST00000200125 605 ntBASIC23.64■■□□□ 1.37
Pcdh20Q8BIZ0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Pcdh20Q8BIZ0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh20Q8BIZ0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh20Q8BIZ0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh20Q8BIZ0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Pcdh20Q8BIZ0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh20Q8BIZ0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh20Q8BIZ0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh20Q8BIZ0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.62■■□□□ 1.37
Pcdh20Q8BIZ0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh20Q8BIZ0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdh20Q8BIZ0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh20Q8BIZ0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh20Q8BIZ0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh20Q8BIZ0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh20Q8BIZ0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdh20Q8BIZ0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.58■■□□□ 1.37
Pcdh20Q8BIZ0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdh20Q8BIZ0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdh20Q8BIZ0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pcdh20Q8BIZ0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdh20Q8BIZ0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh20Q8BIZ0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh20Q8BIZ0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh20Q8BIZ0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh20Q8BIZ0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh20Q8BIZ0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh20Q8BIZ0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh20Q8BIZ0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh20Q8BIZ0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.52■■□□□ 1.35
Pcdh20Q8BIZ0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.51■■□□□ 1.35
Pcdh20Q8BIZ0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh20Q8BIZ0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh20Q8BIZ0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh20Q8BIZ0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh20Q8BIZ0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh20Q8BIZ0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Pcdh20Q8BIZ0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh20Q8BIZ0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms