Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Clrn3Q8BHH8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Clrn3Q8BHH8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clrn3Q8BHH8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
Clrn3Q8BHH8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn3Q8BHH8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn3Q8BHH8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn3Q8BHH8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn3Q8BHH8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn3Q8BHH8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Clrn3Q8BHH8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clrn3Q8BHH8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clrn3Q8BHH8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Clrn3Q8BHH8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clrn3Q8BHH8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn3Q8BHH8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn3Q8BHH8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.99■■□□□ 1.27
Clrn3Q8BHH8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn3Q8BHH8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn3Q8BHH8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clrn3Q8BHH8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clrn3Q8BHH8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Clrn3Q8BHH8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Clrn3Q8BHH8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.97■■□□□ 1.27
Clrn3Q8BHH8 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.97■■□□□ 1.27
Clrn3Q8BHH8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clrn3Q8BHH8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Clrn3Q8BHH8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Clrn3Q8BHH8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Clrn3Q8BHH8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Clrn3Q8BHH8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Clrn3Q8BHH8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Clrn3Q8BHH8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.94■■□□□ 1.26
Clrn3Q8BHH8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Clrn3Q8BHH8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
Clrn3Q8BHH8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Clrn3Q8BHH8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Clrn3Q8BHH8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Clrn3Q8BHH8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Clrn3Q8BHH8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Clrn3Q8BHH8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Clrn3Q8BHH8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Clrn3Q8BHH8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn3Q8BHH8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Clrn3Q8BHH8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Clrn3Q8BHH8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Clrn3Q8BHH8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Clrn3Q8BHH8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Clrn3Q8BHH8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Clrn3Q8BHH8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Clrn3Q8BHH8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Clrn3Q8BHH8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Clrn3Q8BHH8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Clrn3Q8BHH8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.87■■□□□ 1.25
Clrn3Q8BHH8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn3Q8BHH8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn3Q8BHH8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Clrn3Q8BHH8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Clrn3Q8BHH8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.85■■□□□ 1.25
Clrn3Q8BHH8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Clrn3Q8BHH8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Clrn3Q8BHH8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Clrn3Q8BHH8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Clrn3Q8BHH8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Clrn3Q8BHH8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.81■■□□□ 1.24
Clrn3Q8BHH8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Clrn3Q8BHH8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Clrn3Q8BHH8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Clrn3Q8BHH8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Clrn3Q8BHH8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.79■■□□□ 1.24
Clrn3Q8BHH8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Clrn3Q8BHH8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Clrn3Q8BHH8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Clrn3Q8BHH8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Clrn3Q8BHH8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.78■■□□□ 1.24
Clrn3Q8BHH8 Gm9397-201ENSMUST00000200125 605 ntBASIC22.78■■□□□ 1.24
Clrn3Q8BHH8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Clrn3Q8BHH8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Clrn3Q8BHH8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Clrn3Q8BHH8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Clrn3Q8BHH8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Clrn3Q8BHH8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clrn3Q8BHH8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Clrn3Q8BHH8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 Gm24970-201ENSMUST00000175582 82 ntBASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Clrn3Q8BHH8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Clrn3Q8BHH8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Clrn3Q8BHH8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Clrn3Q8BHH8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.69■■□□□ 1.22
Clrn3Q8BHH8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.68■■□□□ 1.22
Clrn3Q8BHH8 Gm45855-201ENSMUST00000212546 880 ntBASIC22.68■■□□□ 1.22
Clrn3Q8BHH8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Clrn3Q8BHH8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Clrn3Q8BHH8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.67■■□□□ 1.22
Clrn3Q8BHH8 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.67■■□□□ 1.22
Clrn3Q8BHH8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms