Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.08■■■□□ 2.09
CPNE8Q86YQ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CPNE8Q86YQ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CPNE8Q86YQ8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CPNE8Q86YQ8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CPNE8Q86YQ8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CPNE8Q86YQ8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CPNE8Q86YQ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.06■■■□□ 2.08
CPNE8Q86YQ8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.05■■■□□ 2.08
CPNE8Q86YQ8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
CPNE8Q86YQ8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CPNE8Q86YQ8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CPNE8Q86YQ8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CPNE8Q86YQ8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CPNE8Q86YQ8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CPNE8Q86YQ8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.02■■■□□ 2.08
CPNE8Q86YQ8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CPNE8Q86YQ8 AL135925.1-201ENST00000605920 1701 ntBASIC28.01■■■□□ 2.07
CPNE8Q86YQ8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CPNE8Q86YQ8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CPNE8Q86YQ8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CPNE8Q86YQ8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CPNE8Q86YQ8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CPNE8Q86YQ8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.98■■■□□ 2.07
CPNE8Q86YQ8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.98■■■□□ 2.07
CPNE8Q86YQ8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CPNE8Q86YQ8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CPNE8Q86YQ8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.97■■■□□ 2.07
CPNE8Q86YQ8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.97■■■□□ 2.07
CPNE8Q86YQ8 RARRES2P7-201ENST00000567349 469 ntBASIC27.96■■■□□ 2.07
CPNE8Q86YQ8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CPNE8Q86YQ8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CPNE8Q86YQ8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPNE8Q86YQ8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPNE8Q86YQ8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPNE8Q86YQ8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
CPNE8Q86YQ8 SETD8P1-201ENST00000623146 1180 ntBASIC27.93■■■□□ 2.06
CPNE8Q86YQ8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CPNE8Q86YQ8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.92■■■□□ 2.06
CPNE8Q86YQ8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
CPNE8Q86YQ8 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
CPNE8Q86YQ8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
CPNE8Q86YQ8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
CPNE8Q86YQ8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
CPNE8Q86YQ8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
CPNE8Q86YQ8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CPNE8Q86YQ8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
CPNE8Q86YQ8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CPNE8Q86YQ8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.87■■■□□ 2.05
CPNE8Q86YQ8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.86■■■□□ 2.05
CPNE8Q86YQ8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CPNE8Q86YQ8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
CPNE8Q86YQ8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CPNE8Q86YQ8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
CPNE8Q86YQ8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CPNE8Q86YQ8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.82■■■□□ 2.04
CPNE8Q86YQ8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
CPNE8Q86YQ8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.81■■■□□ 2.04
CPNE8Q86YQ8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CPNE8Q86YQ8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CPNE8Q86YQ8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CPNE8Q86YQ8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CPNE8Q86YQ8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPNE8Q86YQ8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CPNE8Q86YQ8 AC136428.2-201ENST00000563187 214 ntBASIC27.76■■■□□ 2.03
CPNE8Q86YQ8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
CPNE8Q86YQ8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CPNE8Q86YQ8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
CPNE8Q86YQ8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CPNE8Q86YQ8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CPNE8Q86YQ8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.74■■■□□ 2.03
CPNE8Q86YQ8 CAHM-201ENST00000604200 896 ntBASIC27.74■■■□□ 2.03
CPNE8Q86YQ8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
CPNE8Q86YQ8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CPNE8Q86YQ8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CPNE8Q86YQ8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CPNE8Q86YQ8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CPNE8Q86YQ8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CPNE8Q86YQ8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CPNE8Q86YQ8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CPNE8Q86YQ8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CPNE8Q86YQ8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CPNE8Q86YQ8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CPNE8Q86YQ8 AL391121.1-201ENST00000607967 1349 ntBASIC27.67■■■□□ 2.02
CPNE8Q86YQ8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
CPNE8Q86YQ8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.66■■■□□ 2.02
CPNE8Q86YQ8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.65■■■□□ 2.02
CPNE8Q86YQ8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CPNE8Q86YQ8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
CPNE8Q86YQ8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CPNE8Q86YQ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CPNE8Q86YQ8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CPNE8Q86YQ8 AC097358.2-201ENST00000607541 1159 ntBASIC27.64■■■□□ 2.02
CPNE8Q86YQ8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
CPNE8Q86YQ8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms