Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.55■■■□□ 2
C12orf40Q86WS4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
C12orf40Q86WS4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
C12orf40Q86WS4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.53■■■□□ 2
C12orf40Q86WS4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.53■■■□□ 2
C12orf40Q86WS4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
C12orf40Q86WS4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
C12orf40Q86WS4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.52■■■□□ 2
C12orf40Q86WS4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
C12orf40Q86WS4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
C12orf40Q86WS4 MIR6090-201ENST00000622481 60 ntBASIC27.48■■□□□ 1.99
C12orf40Q86WS4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.47■■□□□ 1.99
C12orf40Q86WS4 DUX4L29-201ENST00000425409 679 ntBASIC27.47■■□□□ 1.99
C12orf40Q86WS4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.47■■□□□ 1.99
C12orf40Q86WS4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
C12orf40Q86WS4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.46■■□□□ 1.99
C12orf40Q86WS4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
C12orf40Q86WS4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf40Q86WS4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf40Q86WS4 AC021231.2-201ENST00000594613 730 ntBASIC27.45■■□□□ 1.98
C12orf40Q86WS4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
C12orf40Q86WS4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.44■■□□□ 1.98
C12orf40Q86WS4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
C12orf40Q86WS4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.43■■□□□ 1.98
C12orf40Q86WS4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.42■■□□□ 1.98
C12orf40Q86WS4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
C12orf40Q86WS4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
C12orf40Q86WS4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
C12orf40Q86WS4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.42■■□□□ 1.98
C12orf40Q86WS4 HLA-V-202ENST00000446817 847 ntBASIC27.41■■□□□ 1.98
C12orf40Q86WS4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.41■■□□□ 1.98
C12orf40Q86WS4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.41■■□□□ 1.98
C12orf40Q86WS4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.4■■□□□ 1.98
C12orf40Q86WS4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
C12orf40Q86WS4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
C12orf40Q86WS4 AC108673.1-201ENST00000510422 1159 ntBASIC27.39■■□□□ 1.98
C12orf40Q86WS4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
C12orf40Q86WS4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.38■■□□□ 1.97
C12orf40Q86WS4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
C12orf40Q86WS4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
C12orf40Q86WS4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
C12orf40Q86WS4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
C12orf40Q86WS4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
C12orf40Q86WS4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
C12orf40Q86WS4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
C12orf40Q86WS4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.34■■□□□ 1.97
C12orf40Q86WS4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
C12orf40Q86WS4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
C12orf40Q86WS4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.33■■□□□ 1.97
C12orf40Q86WS4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
C12orf40Q86WS4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
C12orf40Q86WS4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
C12orf40Q86WS4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
C12orf40Q86WS4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
C12orf40Q86WS4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
C12orf40Q86WS4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
C12orf40Q86WS4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.31■■□□□ 1.96
C12orf40Q86WS4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.31■■□□□ 1.96
C12orf40Q86WS4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
C12orf40Q86WS4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
C12orf40Q86WS4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
C12orf40Q86WS4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
C12orf40Q86WS4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
C12orf40Q86WS4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.29■■□□□ 1.96
C12orf40Q86WS4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
C12orf40Q86WS4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
C12orf40Q86WS4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
C12orf40Q86WS4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
C12orf40Q86WS4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
C12orf40Q86WS4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.24■■□□□ 1.95
C12orf40Q86WS4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.24■■□□□ 1.95
C12orf40Q86WS4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.24■■□□□ 1.95
C12orf40Q86WS4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
C12orf40Q86WS4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
C12orf40Q86WS4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.23■■□□□ 1.95
C12orf40Q86WS4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
C12orf40Q86WS4 AL161658.1-201ENST00000623641 1967 ntBASIC27.2■■□□□ 1.94
C12orf40Q86WS4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
C12orf40Q86WS4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
C12orf40Q86WS4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
C12orf40Q86WS4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
C12orf40Q86WS4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
C12orf40Q86WS4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
C12orf40Q86WS4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
C12orf40Q86WS4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
C12orf40Q86WS4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
C12orf40Q86WS4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
C12orf40Q86WS4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
C12orf40Q86WS4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
C12orf40Q86WS4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
C12orf40Q86WS4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.15■■□□□ 1.94
C12orf40Q86WS4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
C12orf40Q86WS4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.14■■□□□ 1.94
C12orf40Q86WS4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
C12orf40Q86WS4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
C12orf40Q86WS4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.11■■□□□ 1.93
C12orf40Q86WS4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
C12orf40Q86WS4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.11■■□□□ 1.93
C12orf40Q86WS4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.11■■□□□ 1.93
C12orf40Q86WS4 LINC01971-201ENST00000617888 1048 ntBASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms