Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Upk3bQ80YF6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk3bQ80YF6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Upk3bQ80YF6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Upk3bQ80YF6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Upk3bQ80YF6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Upk3bQ80YF6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Upk3bQ80YF6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.82■□□□□ 0.92
Upk3bQ80YF6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk3bQ80YF6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Upk3bQ80YF6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk3bQ80YF6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upk3bQ80YF6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Upk3bQ80YF6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.79■□□□□ 0.92
Upk3bQ80YF6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk3bQ80YF6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk3bQ80YF6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Upk3bQ80YF6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk3bQ80YF6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.77■□□□□ 0.91
Upk3bQ80YF6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk3bQ80YF6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Upk3bQ80YF6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Upk3bQ80YF6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upk3bQ80YF6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upk3bQ80YF6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk3bQ80YF6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upk3bQ80YF6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.72■□□□□ 0.91
Upk3bQ80YF6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.72■□□□□ 0.91
Upk3bQ80YF6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.71■□□□□ 0.91
Upk3bQ80YF6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upk3bQ80YF6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.69■□□□□ 0.9
Upk3bQ80YF6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk3bQ80YF6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Upk3bQ80YF6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk3bQ80YF6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upk3bQ80YF6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Upk3bQ80YF6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk3bQ80YF6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Upk3bQ80YF6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Upk3bQ80YF6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Upk3bQ80YF6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk3bQ80YF6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk3bQ80YF6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Upk3bQ80YF6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bQ80YF6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bQ80YF6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bQ80YF6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bQ80YF6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk3bQ80YF6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bQ80YF6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Upk3bQ80YF6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Upk3bQ80YF6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk3bQ80YF6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk3bQ80YF6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Upk3bQ80YF6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bQ80YF6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Upk3bQ80YF6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Upk3bQ80YF6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upk3bQ80YF6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Upk3bQ80YF6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk3bQ80YF6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Upk3bQ80YF6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Upk3bQ80YF6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk3bQ80YF6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Upk3bQ80YF6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bQ80YF6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Upk3bQ80YF6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.55■□□□□ 0.88
Upk3bQ80YF6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk3bQ80YF6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk3bQ80YF6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bQ80YF6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk3bQ80YF6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bQ80YF6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bQ80YF6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk3bQ80YF6 Gm26115-201ENSMUST00000175605 87 ntBASIC20.52■□□□□ 0.88
Upk3bQ80YF6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bQ80YF6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bQ80YF6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.51■□□□□ 0.87
Upk3bQ80YF6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk3bQ80YF6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.5■□□□□ 0.87
Upk3bQ80YF6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk3bQ80YF6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk3bQ80YF6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Upk3bQ80YF6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Upk3bQ80YF6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upk3bQ80YF6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Upk3bQ80YF6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk3bQ80YF6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk3bQ80YF6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upk3bQ80YF6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk3bQ80YF6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Upk3bQ80YF6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.44■□□□□ 0.86
Upk3bQ80YF6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upk3bQ80YF6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms