Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBA1AQ71U36 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TUBA1AQ71U36 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBA1AQ71U36 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.28■■□□□ 1.48
TUBA1AQ71U36 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TUBA1AQ71U36 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TUBA1AQ71U36 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.27■■□□□ 1.48
TUBA1AQ71U36 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
TUBA1AQ71U36 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.24■■□□□ 1.47
TUBA1AQ71U36 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TUBA1AQ71U36 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TUBA1AQ71U36 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
TUBA1AQ71U36 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TUBA1AQ71U36 SETD8P1-201ENST00000623146 1180 ntBASIC24.2■■□□□ 1.46
TUBA1AQ71U36 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TUBA1AQ71U36 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TUBA1AQ71U36 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TUBA1AQ71U36 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TUBA1AQ71U36 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TUBA1AQ71U36 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TUBA1AQ71U36 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TUBA1AQ71U36 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TUBA1AQ71U36 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.17■■□□□ 1.46
TUBA1AQ71U36 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TUBA1AQ71U36 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.17■■□□□ 1.46
TUBA1AQ71U36 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TUBA1AQ71U36 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TUBA1AQ71U36 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TUBA1AQ71U36 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TUBA1AQ71U36 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.16■■□□□ 1.46
TUBA1AQ71U36 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TUBA1AQ71U36 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.15■■□□□ 1.46
TUBA1AQ71U36 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.15■■□□□ 1.46
TUBA1AQ71U36 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.14■■□□□ 1.46
TUBA1AQ71U36 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
TUBA1AQ71U36 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TUBA1AQ71U36 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TUBA1AQ71U36 AC142086.6-201ENST00000621154 1765 ntBASIC24.14■■□□□ 1.45
TUBA1AQ71U36 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TUBA1AQ71U36 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
TUBA1AQ71U36 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBA1AQ71U36 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
TUBA1AQ71U36 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TUBA1AQ71U36 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TUBA1AQ71U36 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TUBA1AQ71U36 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TUBA1AQ71U36 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.09■■□□□ 1.45
TUBA1AQ71U36 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TUBA1AQ71U36 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.08■■□□□ 1.45
TUBA1AQ71U36 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.08■■□□□ 1.45
TUBA1AQ71U36 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TUBA1AQ71U36 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TUBA1AQ71U36 ST7-AS1-201ENST00000456775 1889 ntBASIC24.07■■□□□ 1.44
TUBA1AQ71U36 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TUBA1AQ71U36 AC097358.2-201ENST00000607541 1159 ntBASIC24.07■■□□□ 1.44
TUBA1AQ71U36 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TUBA1AQ71U36 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TUBA1AQ71U36 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TUBA1AQ71U36 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.05■■□□□ 1.44
TUBA1AQ71U36 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TUBA1AQ71U36 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TUBA1AQ71U36 AL133380.1-201ENST00000506013 324 ntBASIC24.04■■□□□ 1.44
TUBA1AQ71U36 AC136428.2-201ENST00000563187 214 ntBASIC24.04■■□□□ 1.44
TUBA1AQ71U36 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TUBA1AQ71U36 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TUBA1AQ71U36 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.02■■□□□ 1.44
TUBA1AQ71U36 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.02■■□□□ 1.44
TUBA1AQ71U36 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.02■■□□□ 1.44
TUBA1AQ71U36 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TUBA1AQ71U36 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TUBA1AQ71U36 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TUBA1AQ71U36 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TUBA1AQ71U36 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24■■□□□ 1.43
TUBA1AQ71U36 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TUBA1AQ71U36 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.99■■□□□ 1.43
TUBA1AQ71U36 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.99■■□□□ 1.43
TUBA1AQ71U36 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TUBA1AQ71U36 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TUBA1AQ71U36 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TUBA1AQ71U36 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.97■■□□□ 1.43
TUBA1AQ71U36 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TUBA1AQ71U36 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms