Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Scn10aQ6QIY3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Scn10aQ6QIY3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
Scn10aQ6QIY3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Scn10aQ6QIY3 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.58■■■□□ 2.33
Scn10aQ6QIY3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Scn10aQ6QIY3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Scn10aQ6QIY3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 Nkain2-201ENSMUST00000092602 558 ntBASIC29.55■■■□□ 2.32
Scn10aQ6QIY3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Scn10aQ6QIY3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
Scn10aQ6QIY3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Scn10aQ6QIY3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Scn10aQ6QIY3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Scn10aQ6QIY3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Scn10aQ6QIY3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Scn10aQ6QIY3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Scn10aQ6QIY3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Scn10aQ6QIY3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Scn10aQ6QIY3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Scn10aQ6QIY3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
Scn10aQ6QIY3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Scn10aQ6QIY3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Scn10aQ6QIY3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Scn10aQ6QIY3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Scn10aQ6QIY3 Gm7432-201ENSMUST00000210343 879 ntBASIC29.43■■■□□ 2.3
Scn10aQ6QIY3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Scn10aQ6QIY3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Scn10aQ6QIY3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Scn10aQ6QIY3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Scn10aQ6QIY3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Scn10aQ6QIY3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
Scn10aQ6QIY3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Scn10aQ6QIY3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Scn10aQ6QIY3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Scn10aQ6QIY3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.31■■■□□ 2.28
Scn10aQ6QIY3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Scn10aQ6QIY3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.3■■■□□ 2.28
Scn10aQ6QIY3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Scn10aQ6QIY3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Scn10aQ6QIY3 Gm11599-201ENSMUST00000118720 878 ntBASIC29.29■■■□□ 2.28
Scn10aQ6QIY3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Scn10aQ6QIY3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Scn10aQ6QIY3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.28■■■□□ 2.28
Scn10aQ6QIY3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.26■■■□□ 2.28
Scn10aQ6QIY3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.26■■■□□ 2.27
Scn10aQ6QIY3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.25■■■□□ 2.27
Scn10aQ6QIY3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Scn10aQ6QIY3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.23■■■□□ 2.27
Scn10aQ6QIY3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Scn10aQ6QIY3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Scn10aQ6QIY3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Scn10aQ6QIY3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Scn10aQ6QIY3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.16■■■□□ 2.26
Scn10aQ6QIY3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Scn10aQ6QIY3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Scn10aQ6QIY3 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.15■■■□□ 2.26
Scn10aQ6QIY3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.15■■■□□ 2.26
Scn10aQ6QIY3 Gm11175-201ENSMUST00000116172 543 ntBASIC29.15■■■□□ 2.26
Scn10aQ6QIY3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Scn10aQ6QIY3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Scn10aQ6QIY3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Scn10aQ6QIY3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Scn10aQ6QIY3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Scn10aQ6QIY3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.12■■■□□ 2.25
Scn10aQ6QIY3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.12■■■□□ 2.25
Scn10aQ6QIY3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Scn10aQ6QIY3 Mir6538-201ENSMUST00000183713 110 ntBASIC29.12■■■□□ 2.25
Scn10aQ6QIY3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.09■■■□□ 2.25
Scn10aQ6QIY3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Scn10aQ6QIY3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.08■■■□□ 2.25
Scn10aQ6QIY3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.08■■■□□ 2.25
Scn10aQ6QIY3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Scn10aQ6QIY3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Scn10aQ6QIY3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Scn10aQ6QIY3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Scn10aQ6QIY3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Scn10aQ6QIY3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scn10aQ6QIY3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Scn10aQ6QIY3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Scn10aQ6QIY3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Scn10aQ6QIY3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Scn10aQ6QIY3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Scn10aQ6QIY3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Scn10aQ6QIY3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Scn10aQ6QIY3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.01■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms