Protein–RNA interactions for Protein: Q6PJ21

SPSB3, SPRY domain-containing SOCS box protein 3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3Q6PJ21 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPSB3Q6PJ21 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPSB3Q6PJ21 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.42■■□□□ 1.02
SPSB3Q6PJ21 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPSB3Q6PJ21 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.41■■□□□ 1.02
SPSB3Q6PJ21 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SPSB3Q6PJ21 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.41■■□□□ 1.02
SPSB3Q6PJ21 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPSB3Q6PJ21 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.4■■□□□ 1.02
SPSB3Q6PJ21 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPSB3Q6PJ21 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.4■■□□□ 1.02
SPSB3Q6PJ21 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPSB3Q6PJ21 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPSB3Q6PJ21 ST7-AS1-201ENST00000456775 1889 ntBASIC21.39■■□□□ 1.01
SPSB3Q6PJ21 AC142086.6-201ENST00000621154 1765 ntBASIC21.38■■□□□ 1.01
SPSB3Q6PJ21 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPSB3Q6PJ21 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SPSB3Q6PJ21 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPSB3Q6PJ21 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SPSB3Q6PJ21 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.37■■□□□ 1.01
SPSB3Q6PJ21 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPSB3Q6PJ21 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.36■■□□□ 1.01
SPSB3Q6PJ21 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPSB3Q6PJ21 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPSB3Q6PJ21 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPSB3Q6PJ21 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPSB3Q6PJ21 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPSB3Q6PJ21 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SPSB3Q6PJ21 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPSB3Q6PJ21 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPSB3Q6PJ21 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.33■■□□□ 1
SPSB3Q6PJ21 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.32■■□□□ 1
SPSB3Q6PJ21 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPSB3Q6PJ21 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPSB3Q6PJ21 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPSB3Q6PJ21 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPSB3Q6PJ21 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPSB3Q6PJ21 AC135731.1-201ENST00000569415 2548 ntBASIC21.31■■□□□ 1
SPSB3Q6PJ21 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPSB3Q6PJ21 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.3■■□□□ 1
SPSB3Q6PJ21 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.3■■□□□ 1
SPSB3Q6PJ21 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPSB3Q6PJ21 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPSB3Q6PJ21 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPSB3Q6PJ21 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.27■■□□□ 1
SPSB3Q6PJ21 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SPSB3Q6PJ21 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SPSB3Q6PJ21 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.27■□□□□ 0.99
SPSB3Q6PJ21 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPSB3Q6PJ21 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPSB3Q6PJ21 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPSB3Q6PJ21 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPSB3Q6PJ21 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPSB3Q6PJ21 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPSB3Q6PJ21 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.24■□□□□ 0.99
SPSB3Q6PJ21 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPSB3Q6PJ21 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPSB3Q6PJ21 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPSB3Q6PJ21 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPSB3Q6PJ21 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPSB3Q6PJ21 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPSB3Q6PJ21 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
SPSB3Q6PJ21 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPSB3Q6PJ21 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SPSB3Q6PJ21 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPSB3Q6PJ21 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SPSB3Q6PJ21 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.2■□□□□ 0.98
SPSB3Q6PJ21 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPSB3Q6PJ21 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPSB3Q6PJ21 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPSB3Q6PJ21 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.19■□□□□ 0.98
SPSB3Q6PJ21 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPSB3Q6PJ21 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SPSB3Q6PJ21 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPSB3Q6PJ21 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPSB3Q6PJ21 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.18■□□□□ 0.98
SPSB3Q6PJ21 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPSB3Q6PJ21 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPSB3Q6PJ21 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPSB3Q6PJ21 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.17■□□□□ 0.98
SPSB3Q6PJ21 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPSB3Q6PJ21 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPSB3Q6PJ21 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SPSB3Q6PJ21 AL121749.1-202ENST00000609313 2153 ntBASIC21.15■□□□□ 0.98
SPSB3Q6PJ21 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SPSB3Q6PJ21 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.15■□□□□ 0.98
SPSB3Q6PJ21 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SPSB3Q6PJ21 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPSB3Q6PJ21 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms